Pairwise Alignments

Query, 475 a.a., Type I secretion system, outer membrane component LapE from Variovorax sp. SCN45

Subject, 479 a.a., Type I secretion outer membrane protein, TolC precursor from Pseudomonas fluorescens FW300-N2E2

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 114/443 (25%), Positives = 188/443 (42%), Gaps = 55/443 (12%)

Query: 32  KLSRRLAPSALAKELGIQPGLALPEAAETTTPLELTDAVRQAVARHPSISDAIAMLAQQS 91
           KLS  LA S  +       G+A    A  TT  +L    ++AV  +  ++ A A    Q 
Sbjct: 4   KLSLALAVSCASN------GMAWAAEAPLTTRTDLVSVYQEAVDNNADLAAARAQYGAQK 57

Query: 92  GGVDVARAGYYPLVRVGMGAGVNGGASATQGGGKRGVATASVSQMLYDFGKVSGAVGQSE 151
             V  ARAG  P   +  GA +N     T+    +   TA+ S  +Y    +S  + +++
Sbjct: 58  EVVPQARAGLLP--NLSAGADLNN----TRTELDQPAMTANRSSTVYQ-ATLSQPIFRAD 110

Query: 152 AQVQRQQATVLK-----QIDAIAQ----QAAEAVVMTHRYQSLVAIAQEQVQAVEKVLET 202
              Q Q A  +      Q+ A  Q    Q+AE+     R Q  +A  + +  A ++ L+ 
Sbjct: 111 RWFQLQAAKSVDEQASLQLSATEQNMILQSAESYFNVLRSQDNLASTKAEEAAFKRQLDQ 170

Query: 203 ARLRADAGLSTKADPIQAESRVDSARANLLQVKSQLAQWRERLGTLLGRS---------V 253
           +  R D GLS K D +Q+++  D+ARAN +  + Q+    E L TL  R           
Sbjct: 171 SNERFDVGLSDKTDVLQSQASYDTARANRILAQRQVDDAFEALITLTNRQYNSLQGIVHT 230

Query: 254 PPRMAPLPEHLASELRIDLQPDTSLMPEVLAAEAERRAATAQLEVAKAQRYPTISLDASV 313
            P + P P    ++  +D     +L   +LA+     AA   L   KA   PT+   A  
Sbjct: 231 LPILPPAPND--AKAWVDTAAKQNL--NLLASNYAVTAAEDTLRQRKAGHAPTLDAIAQY 286

Query: 314 NRPMGGMNSGV--------PERSGG---SHSVMLNLSSVLYQGGALEAQVNTAIAAEQAA 362
            +   G N G+         +R GG     ++ L LS  LY GG   +QV  + +     
Sbjct: 287 KK---GDNDGLGFTNPNPTGQRYGGDAEQRTIGLQLSIPLYSGGLTSSQVRESYSQLTQT 343

Query: 363 RMRIETARLNAGDQVRNFREQVIGAQARLGVLADRRRSIV---EARDLYREQYTLGTRSI 419
             + E  R    +  RN    V      +  +  RR+SI+    A +     Y +GTR+I
Sbjct: 344 EQQREALRRQVVENTRNLHRAV---NTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNI 400

Query: 420 LDLLNAEQEIHQAAADEEAVLHD 442
           +D+L+A+++++ +  +     +D
Sbjct: 401 VDVLDAQRQLYTSVRNYNNARYD 423