Pairwise Alignments

Query, 475 a.a., Type I secretion system, outer membrane component LapE from Variovorax sp. SCN45

Subject, 479 a.a., Type I secretion outer membrane protein, TolC from Pseudomonas syringae pv. syringae B728a

 Score = 88.6 bits (218), Expect = 4e-22
 Identities = 106/417 (25%), Positives = 178/417 (42%), Gaps = 45/417 (10%)

Query: 57  AAETTTPLE--LTDAVRQAVARHPSISDAIAMLAQQSGGVDVARAGYYPLVRVGMGAGVN 114
           AAE   P +  L    +QAV  +  ++ + A    +   V  ARAG  P +    G+  N
Sbjct: 21  AAELPMPTQTGLLSVYQQAVDNNADLAASRADYDARKEAVPQARAGLLPNIS---GSAQN 77

Query: 115 GGASATQGGGKRGVATASVSQMLYDFGKVSGAVGQSEAQVQRQQATVLKQIDAIAQQAAE 174
              S+T+    +  A AS S  LY    +S  + +++   Q Q A    +  A+   A E
Sbjct: 78  ---SSTRTSIDQPRAVASRSGNLYQ-ATLSQPIFRADRWFQLQAAEASNEQAALELSATE 133

Query: 175 AVVMTHRYQSLVAIAQEQVQ---------AVEKVLETARLRADAGLSTKADPIQAESRVD 225
             ++    QS  ++ + Q           A ++ L+ A  R D GLS K D +QA++  D
Sbjct: 134 QNLILQSAQSYFSVLRAQDNLASTKAEEAAFKRQLDQANERFDVGLSDKTDVLQAQASYD 193

Query: 226 SARANLLQVKSQLAQWRERLGTLLGRS---------VPPRMAPLPEHLASELRIDLQPDT 276
           ++RA+ L  + Q+    + L TL  R            P +AP P    + +    Q + 
Sbjct: 194 TSRASRLIAQRQVEDAFQALVTLTNREYNSIEGIVHTLPVLAPTPNDAKAWVDTAAQQNL 253

Query: 277 SLMPEVLAAEAERRAATAQLEVAKAQRYPTISLDASVNR----PMGGMNSGVPERSGG-- 330
           +L    LA+     AA   L   KA   PT+   A+  R     +G  N     R+ G  
Sbjct: 254 NL----LASNYAVNAAEETLRQRKAGHAPTLDAVATYQRGDNDALGFSNPNYTGRNYGGD 309

Query: 331 --SHSVMLNLSSVLYQGGALEAQVNTAIAAEQAARMRIETARLNAGDQVRNFREQVIGAQ 388
               S+ + L+  +Y GG   +QV  A A    +  R E+ R    +  RN    V    
Sbjct: 310 VEQRSIGVQLNIPIYSGGLTSSQVREAYARLSQSEQRRESLRRQVVENTRNLHRAV---N 366

Query: 389 ARLGVLADRRRSIV---EARDLYREQYTLGTRSILDLLNAEQEIHQAAADEEAVLHD 442
             +  +  R++SI+    A +     Y +GTR+I+D+L+A+++++ +  D     +D
Sbjct: 367 TDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYASVRDYNNTRYD 423