Pairwise Alignments

Query, 309 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (420), Expect = 6e-46
 Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 21/311 (6%)

Query: 1   MIQIEDMQLAAALLREPSLSAAARALDVTPPALSMRLRKLEATLGLSLASRTARRLSLTS 60
           M +  DM L A++++   L+AA R L ++P  ++ RL+ LE   G+ L +R+ R LSLT 
Sbjct: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60

Query: 61  EGERFAREAAALLGQIEGLRESMQRDDKRLTGTLRIAAPFGYGRQYVAPMLARFARLHPG 120
            G  + +    +L  +      +Q   K + GTL+++AP   G+Q++AP+LA F   +P 
Sbjct: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120

Query: 121 LRVQLDLRET-PWPDRHDADAVIHIGAVRDSSWVARTLSANERWLCASPAYLRRHGEPRT 179
           +   L L +          D VI  G + DSS ++R L+ + R LCASPAYL R G P+T
Sbjct: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180

Query: 180 PRDVLTHACICIRENDEDVTLWHVRPAADAANAAEGKRAAARETLRVSPAYVTNDGGVAR 239
           P+D+  H C+ +  ++E++  WH             +     + + V P    +DG V R
Sbjct: 181 PQDLAQHDCLAMVRSNEEMKTWHF------------QENEQHKVITVVPKSFADDGEVIR 228

Query: 240 QWAEQGMGLVLRSEWDAADAVARGTLVRVLPGW--------RFDSAPVTLLVPTRKGRTA 291
           QWA  GMG+ L+S  D  D + +  LV VL G+            A + +L  +R+ +  
Sbjct: 229 QWALAGMGIALKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPK 288

Query: 292 RVAAIVDFLVE 302
           R+   +DFL+E
Sbjct: 289 RLRLFIDFLIE 299