Pairwise Alignments

Query, 432 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 454 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  280 bits (717), Expect = 5e-80
 Identities = 172/434 (39%), Positives = 250/434 (57%), Gaps = 51/434 (11%)

Query: 43  KTAPAAYYSPPEPPLPRASLLVWIIAGLLLALLAWAWSFKLDEVSTGSGKVVPSSREQMI 102
           +TA A     P     R+ + VW+ A L++  L WA    L EV+TG GK +PSS+ Q+I
Sbjct: 28  ETAGATLQDSPR----RSRVTVWLAAVLIVTGLVWAKLAVLQEVTTGEGKAIPSSKIQVI 83

Query: 103 QSLEGGILVDLKVREGDIVDEGEVLAQLDRTKTESTVQESASRVRAALAMSARLTAEVGG 162
           Q+LEGGI+ ++ VREG +V++G+ L +LD T+ +S   ES +   A  A   RL+AE  G
Sbjct: 84  QNLEGGIVTEIFVREGQMVNKGDTLLRLDDTRYQSNKGESEADRYALTAQVERLSAEAEG 143

Query: 163 TPLAFPPEVSSDADLV-RTETALYQSRREQLASSLSGVTQ-------------------- 201
            P     EV + A  V   E +LY+ R+ +LAS    +T+                    
Sbjct: 144 RPFNLSAEVIAKAPQVAEDERSLYEQRQRRLASEQRTLTEQLRQKTQELAEFRSKQGQFS 203

Query: 202 -ALSLMRRELALTEPLVARGAASDVEVLRLKRQ---------------------INEAET 239
            AL+L++ E+ ++ PLV  GA S VE+LRLKR                      INE ++
Sbjct: 204 SALALLQEEMNMSAPLVRTGAVSPVEILRLKRSAVEIRGSLNATTLAIPRAESAINEIKS 263

Query: 240 KAADLKSQYYVKAREDLAKANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIAVTTVG 299
           K  + +  +  +A +DL +   E+    + +    D +TR T  SPV G++K + V T+G
Sbjct: 264 KIDESEQTFRSEAAKDLNEKRTELSKITASSIAIDDRVTRTTVVSPVHGVIKQLKVNTIG 323

Query: 300 GVLPPGGKLMVIVPLDEKLLVEARISPRDVAFIHPGQEAAVKVTAYDYAIFGDLPGKVTT 359
           GV+ PG  ++ IVPL++ LL+EA++ P+DVAF+HPGQ+A VK +AYDY I+G L  K+  
Sbjct: 324 GVVQPGNDMVEIVPLEDNLLIEAKVRPQDVAFLHPGQKAMVKFSAYDYTIYGGLSAKLEL 383

Query: 360 ISPDTIQDDVKRDVYYYRVYIRTDVDHLKNKNGQSFPIVPGMIATVDIRTGSKSVLDYLL 419
           I  DTI DD  +   +Y + +RTD +HL   + +   I+PGM+ATVDI TG KSVLDYLL
Sbjct: 384 IGADTITDD--KGNSFYLIQVRTDKNHL-GGDAKPLLIIPGMVATVDIITGEKSVLDYLL 440

Query: 420 KPLNKA-GEALRER 432
           KP+ KA  EA+RER
Sbjct: 441 KPVLKARTEAMRER 454