Pairwise Alignments

Query, 432 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 439 a.a., HlyD family protein secretion protein from Sinorhizobium meliloti 1021

 Score =  147 bits (370), Expect = 8e-40
 Identities = 122/419 (29%), Positives = 198/419 (47%), Gaps = 57/419 (13%)

Query: 67  IAGLLLALLA----WAWSFKLDEVSTGSGKVVPSSREQMIQSLEGGILVDLKVREGDIVD 122
           ++ L LAL+A    WA + +L       G V+     + +Q L GGI+ +L V+EGD V+
Sbjct: 23  VSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGELLVKEGDRVE 82

Query: 123 EGEVLAQLDRTKTESTVQESASRVRAALAMSARLTAE-VGGTPLAFPPEVS------SDA 175
            G+VL +LD T   + +    S +    A  ARL AE +G        +++      + A
Sbjct: 83  AGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAERMGAASFEIEEDLAEFIPGTAAA 142

Query: 176 DLVRTETALYQSRRE--------------QLASSLSGVT-------QALSLMRRELALTE 214
            L+  E  L+ SRR               QLA  + G+T       +AL L+  EL   +
Sbjct: 143 KLIEGEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLNAIEEALKLIAEELTGVD 202

Query: 215 PLVARGAASDVEVLRLKRQINEAET--------------KAADLKSQYYV---KAREDLA 257
            L  +G      V  LKRQ  E E               K++++  Q        R +++
Sbjct: 203 SLFGQGLVPMQRVTTLKRQRAELEGGRGRHIAARAQARGKSSEIDLQILQLDEDRRSEIS 262

Query: 258 KANAEIEAQRSVTRGR----SDSLTRLTFASPVRGIVKDIAVTTVGGVLPPGGKLMVIVP 313
           K   ++EA+ +    R    +D L RL   +P+ G +  +A+ TV GV+ PG  LM++VP
Sbjct: 263 KELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIHTVNGVINPGETLMLVVP 322

Query: 314 LDEKLLVEARISPRDVAFIHPGQEAAVKVTAYDYAIFGDLPGKVTTISPDTIQDDVKRDV 373
             E L VEA+++  D+  I  GQ   ++ +A++     ++  +V T++PD + D+ +   
Sbjct: 323 EAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAEVVTVAPDLVTDE-RTGA 381

Query: 374 YYYRVYIRTDVDHLKNKNGQSFPIVPGMIATVDIRTGSKSVLDYLLKPL-NKAGEALRE 431
            YY + IR   + L    G S  + PGM A V I+   ++V+ YL KPL ++   A RE
Sbjct: 382 SYYPLRIRPKAESLAKLKGLS--LYPGMPAEVFIKIADRTVISYLTKPLTDQMRHAFRE 438