Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 11/288 (3%)

Query: 5   NLRYFLELARSGTLMSAARRLEVDHTTVARRIQALEKEVGAPLFSREAGGHRLTEAGRRL 64
           N+  F+ +   G+   AARRL ++ + V++RI ALE+ +G  L  R      LT+AGR+ 
Sbjct: 6   NIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQY 65

Query: 65  QPQVEAMESAFQAVESTAPASQEGLSGLVRIGATEGFGTVVLAPRLALFAVQHPRLTIDL 124
              V    +  Q  +    + Q  + G +++     FG   +AP L+ F+ Q+P + +++
Sbjct: 66  YEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEV 125

Query: 125 LAMPRLVHLSRREADIVISLERPARGPVVVTKLTDYTLRLYASKQYLSAHKPIKTREDLR 184
               R+V L +   D+V+ +       +V  KL      L AS  YL+     ++  DLR
Sbjct: 126 SLDDRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLR 185

Query: 185 GHTFISYVDDLLFSKELQYLDELHRPDSFALRSTSVLAQHSAVAA-----SAGIAVLPAF 239
           GH  + Y     F   L++  E     S      ++   +S V         GIA++P +
Sbjct: 186 GHNCLFY---SYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRY 242

Query: 240 IAEKDSA---LQPVLPGQANFTRTFWMSMPAETKHLVRMQATWEFLWQ 284
           + E++ A   L PVL      T   +   P       R++   +FL Q
Sbjct: 243 LVEEELAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFLKQ 290