Pairwise Alignments

Query, 275 a.a., ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  195 bits (496), Expect = 2e-54
 Identities = 108/258 (41%), Positives = 159/258 (61%), Gaps = 5/258 (1%)

Query: 1   MSIKITARGVRMDYAARGASERVRVLEGFDLDVRDGEFLSVLGPSGCGKSTFLGILAGLT 60
           MS+ +    V   +   G  + +  L+   L++R GEF+S++G SGCGKST L ++AGL 
Sbjct: 1   MSVFLAVDHVHQVFDLPGGGQYI-ALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLA 59

Query: 61  QRTGGHIAIDGRSVAGINRNQGVVFQGYALFPWLSVLDNIAVGLE--IRGLGKAARRRTA 118
           Q + G I ++GR V     ++ VVFQ Y+L PW +V  NIA+ ++  +    +  RR   
Sbjct: 60  QPSSGGIILEGRQVTEPGPDRMVVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTERRTII 119

Query: 119 QEYLELVGLHGFGERYPHEISGGMKQRVAIARSLAYEPDVLLMDEPFAALDAQTREVLQG 178
           +E ++LVGL    ++YPHEISGGMKQRVAIAR LA  P +LL+DEPF ALDA TR  LQ 
Sbjct: 120 EETIDLVGLRAAADKYPHEISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQE 179

Query: 179 ELLRIWEQHRKTIVFITHSLEEAVYLSDRVAVMTQRP-GRIKDIIDIPLARPRS-AELRH 236
           +L+RI ++   T V +TH ++EA+ LSDRV ++T  P  +I  I+++   RPR   E+  
Sbjct: 180 QLMRICQEAGVTAVMVTHDVDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEMME 239

Query: 237 TAEFAALRHRAWEVLKDE 254
           T  +  LR+     L+ +
Sbjct: 240 TPHYYDLRNELINFLQQQ 257



 Score = 23.9 bits (50), Expect = 0.010
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 248 WEVLKDEVHLGQLGQPRIAAKQ 269
           WE L+D + LGQL    + A Q
Sbjct: 318 WEALEDSIRLGQLEGALMMAAQ 339