Pairwise Alignments

Query, 311 a.a., Alkanesulfonate utilization operon LysR-family regulator Cbl from Variovorax sp. SCN45

Subject, 324 a.a., cys regulon transcriptional activator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  273 bits (699), Expect = 3e-78
 Identities = 138/306 (45%), Positives = 195/306 (63%), Gaps = 1/306 (0%)

Query: 1   MNFQQLRSVRETVRSGFNLTEAAQTLRASQSGVSRQIRDLEQELGIELFVRSGKRLTGLT 60
           M  QQLR + E V+   N++  A+ L  SQ G+S+Q+R LE ELGI++F RSGK LT +T
Sbjct: 1   MKLQQLRYIAEVVKHNLNVSATAENLYTSQPGISKQVRMLEDELGIQIFGRSGKHLTHVT 60

Query: 61  PPGDHLLPIIERVLAESRHLQQAGHIYLAQQQGVLSVAATHSQARYALPRAVQDFRLRFP 120
           P G  ++ I   +L +   +++    Y    QG L++A T +QARYALP  ++ F  R+P
Sbjct: 61  PAGQQVINIANDILGKVESIKKVSEEYTKPDQGELNIATTDTQARYALPNIIRQFIDRYP 120

Query: 121 GVRLHLHQGSPKQVAQMLQDGEADVGIATEALADHAQLLALPCRCWRHAVIAPVAHPLLQ 180
            V LH+HQG+P Q+++    G+AD  IATEA+  ++ L+ LPC  W  +V+ P  HPL  
Sbjct: 121 KVNLHMHQGTPSQISEQAARGDADFAIATEAMHLYSDLIMLPCYHWNRSVVVPKDHPLAT 180

Query: 181 EEGPLTLAQLAAWPLITYDNGLTGRSRIDEAFAREGLAPEVVLAAMDADVIKTYVALGMG 240
               +++  LA +PL+TY  G    S I++AF R  L P VV +A  ADV+KTYV LG+G
Sbjct: 181 RT-QISIEDLARFPLVTYVFGFDRASEIEKAFNRANLEPRVVFSATSADVLKTYVRLGLG 239

Query: 241 VGIVADLACDPERDTHLGALDAGHLFGVNQTKLAVRRGGYLRSYVYAFIECFAPDLPRPV 300
           VG++A +A DP  D  L A+DAGHLF  + TK+  R+G +LRSY+Y FI+ FAP L R V
Sbjct: 240 VGVIASMAIDPNIDKDLVAIDAGHLFAHSTTKIGFRKGSFLRSYMYDFIQHFAPHLTRDV 299

Query: 301 IELAAA 306
           +E A A
Sbjct: 300 VEKAVA 305