Pairwise Alignments

Query, 462 a.a., Transcriptional response regulatory protein GlrR from Variovorax sp. SCN45

Subject, 471 a.a., nitrogen regulation protein NR(I) (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  306 bits (784), Expect = 9e-88
 Identities = 177/443 (39%), Positives = 259/443 (58%), Gaps = 10/443 (2%)

Query: 10  VVDDDPDMLRLLSMRLSSAGYQVTAVTSAETALTQLEIEHPQLVLSDVRLPGRDGLQLFD 69
           ++DDD  +  +L   L  A     +  +AE+    LEI  P++++SD+R+PG DGL L +
Sbjct: 9   ILDDDSSIRWVLEKALQGAKLSTASFAAAESLWQALEISQPRVIVSDIRMPGTDGLTLLE 68

Query: 70  EIRKRHPSLPVILLTAHGTIPDAVEATARGVFTYLTKPYDGRELLDKIAQALALGAPATT 129
            ++  +P +PVI++TAH  +  AV A   G F YL KP+D  E +  + +AL      + 
Sbjct: 69  RLQIHYPHIPVIIMTAHSDLDSAVSAYQAGAFEYLPKPFDIDEAISLVERALTHATEQSP 128

Query: 130 PSKAGDDSWRS-EIVSRSNRMAELLAEARMVAKSDASVLLRGDSGAGKELLARAIHKASA 188
              A +   ++ EI+  +  M E+      +++S  SVL+ G SG GKEL+A A+HK S 
Sbjct: 129 TPVAQETQVKTPEIIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKELVAGALHKHSP 188

Query: 189 RADKPFVAVNCGAIPEALLESELFGHMKGAFTDAHANHKGLFQQADGGTLLLDEIGDMPP 248
           R DKPF+A+N  AIP+ L+ESELFGH KGAFT A    +G F+QA+GGTL LDEIGDMP 
Sbjct: 189 RKDKPFIALNMAAIPKDLIESELFGHEKGAFTGAANVRQGRFEQANGGTLFLDEIGDMPL 248

Query: 249 ALQVKLLRVLQERAVRPLGASQSIQVDVRIVSATHRDLDAAMEAGQFREDLYYRLNVVTL 308
            +Q +LLRVL +     +G   ++QVDVRI++ATH+DL+  +  G FREDL++RLNV+ +
Sbjct: 249 DVQTRLLRVLADGQFYRVGGHSAVQVDVRIIAATHQDLEQLVLKGGFREDLFHRLNVIRI 308

Query: 309 TLPPLSARREDIPLLANHFLQRLSTKYGKRLSGFAPEALKALTTAAWPGNVRQLFNVVEQ 368
            LPPLS RREDIP LA+HFL   + + G        E    L+   WPGNVRQL N    
Sbjct: 309 HLPPLSQRREDIPQLASHFLASAAKEIGVEAKILTKETAAKLSQLPWPGNVRQLENTCRW 368

Query: 369 VCALSS-SPLIPLALVQRALRVPSVEVQTYAEAKQRFERDYLVGL-LKLTDGNVADAARL 426
           +  ++S   ++P  L    L+ P+  +   A+  Q ++      +  KL++GN    + L
Sbjct: 369 LTVMASGQEILPQDLPPELLKEPT-SINPMAKGSQDWQSALTEWIDQKLSEGN----SDL 423

Query: 427 ADRNRTEFYRLLQKHEL--TPGH 447
               +  F R+L +  L  T GH
Sbjct: 424 LTEVQPAFERILLETALRHTQGH 446