Pairwise Alignments

Query, 448 a.a., tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) from Variovorax sp. SCN45

Subject, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (405), Expect = 8e-44
 Identities = 128/460 (27%), Positives = 214/460 (46%), Gaps = 51/460 (11%)

Query: 3   KVFIKTFGCQMNEYDSDKMADVLNAAQGYEPTQNVDEADLILFNTCSVREKAQEKVFSDL 62
           K+   + GC  N  DS+++   L   +GYE   +  ++D+++ NTC   + A ++    +
Sbjct: 34  KIGFVSLGCPKNLVDSERILTQLRT-EGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTI 92

Query: 63  GRVKHLKAKGVKIGVGGCVASQEGQAIIARAPYVDIVFGPQTLHRLPEMLNDRERLDRPQ 122
           G    LK  G K+ V GC+ ++E + I    P V  + GP     + E ++       P+
Sbjct: 93  GEA--LKENG-KVIVTGCLGAREDE-IRQVHPNVLGITGPHAYQNVLEHVHQYA----PK 144

Query: 123 VDISFPEIEKFDHLPPARVEGAT----AFVSIMEGCSKYCSYCVVPYTRGEEVNRPLDDV 178
                P    F  L P      T    A++ I EGC+  C++C++P  RG+ V+RP+ ++
Sbjct: 145 -----PAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEI 199

Query: 179 LVEIAGLADQGVREITLLGQNVNAYRGKMGDTAEIADFA----------LLIEYVAEIPG 228
           + E   L + GV+E+ ++ Q+ +AY     DT     FA           L E + ++  
Sbjct: 200 IGEAERLKNAGVKELLVISQDTSAYGV---DTKHSLGFANGSPVRHNIKALSEELGKMGI 256

Query: 229 IERIRYTTSHPN--EFTPRLIEAYAKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKS 286
             R+ Y   +P+  E  P + E      +++ +L +P QH S R+L  MKR   A     
Sbjct: 257 WVRLHYVYPYPHVDEIIPLMAEG-----KVLPYLDIPFQHASPRVLKMMKRPGQAERTLE 311

Query: 287 TVRKLRAIRPELALSSDFIVGFPGETDDDFNKMMKLIDDCQFDASFSFIFSPRPGTPAAA 346
            ++K R I PEL + S FIVGFPGET++DF  ++  + + Q D    F +SP  G  A  
Sbjct: 312 RIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANE 371

Query: 347 LHDDTPHEVKLARLHTLQAVIDANVKRFGQALVGTTQRVLVE--------GASRKDANEL 398
           + D  P +VK  R      V         Q  +G+T +VL++        G +  DA E+
Sbjct: 372 IEDQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGAIGRTYADAPEI 431

Query: 399 MGRTACNRVVNFEGDARLVGQMTDLRITRSLAYTLRGEVV 438
            G    N   N +      G++ ++ I  +  Y L G ++
Sbjct: 432 DGLVYLNGETNLK-----PGELVNVVIEHADEYDLWGSIL 466