Pairwise Alignments

Query, 310 a.a., tRNA-(cytosine32)-2-thiocytidine synthetase TtcA from Variovorax sp. SCN45

Subject, 324 a.a., tRNA 2-thiocytidine biosynthesis TtcA family protein from Methanococcus maripaludis S2

 Score = 53.5 bits (127), Expect = 6e-12
 Identities = 58/263 (22%), Positives = 111/263 (42%), Gaps = 32/263 (12%)

Query: 31  KRLCRQVGQAIVDYNMIEEGDKVMVCVSGGKDSYALLDILLKLKARAPIHFDIVAVNLD- 89
           + +  ++G+ +   N+I   DK++V +SGGKDS ALL +L   + +  +    V V+L+ 
Sbjct: 56  EEISERMGRFVSKNNIISPKDKILVGLSGGKDSLALLHLLEPYRRKYGVQIYAVTVDLNI 115

Query: 90  -----QKQPGFPEEVLPKYLSDLGVDFHIENQDTYSI-VKRVIPEGK-----TTCGLCSR 138
                  +     E + ++  +L +   I   D   + + +++ E       + C  CS 
Sbjct: 116 NGIRPWTESNKNVEKIAEHCKNLNIPHKIIAHDGNVVEMSKILSENTKGIEYSPCFSCSM 175

Query: 139 LRRGILYRVA----DELGATKVALGHHRDDMLQTFFLNMFFAGKLKSMPP----KLVSDD 190
           +RR +L   A    +     K+A+GH  +D   T   N+F    +K++ P         D
Sbjct: 176 VRRHVLTNYAKNNFESDSNVKIAIGHTLEDNSDTIMANIFKGNIIKALEPIKNFNETDVD 235

Query: 191 GKHI--------VIRPLAYVAEKDTVRWAQHREFPII----PCTLCGSQENLQRKQVGEM 238
            K          +IRP+  V+E+  V+     +         C       N  RK+  E+
Sbjct: 236 FKDFKLNLKSCCMIRPMLNVSEEKIVKALVECDIEYYHDKDECPYSRHNGNGIRKKSHEV 295

Query: 239 LREWDKKYPGRVENMFTALQNVV 261
           L   ++  P   E + +++ N +
Sbjct: 296 LESIEEDVPNIREMVISSILNSI 318