Pairwise Alignments

Query, 543 a.a., Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  238 bits (607), Expect = 4e-67
 Identities = 174/539 (32%), Positives = 253/539 (46%), Gaps = 26/539 (4%)

Query: 7   VSRRSRSLALLAPTAIAALTLACGAVSAK--TLVYCSEGSPENFYPGMNTTGTSFDVTTQ 64
           + R  RS   LA  A A    A  A       LV      P++  P   T    F +   
Sbjct: 1   MKRLFRSAIALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVN 60

Query: 65  VYNTIVEFERGGTKVVPGLAEKWDISADGTVYTFHLRKGVKWHTTSKSFKPTRDFNADDF 124
           VY+ +V F+ G  +V P LAE W IS DG  YTF LR+GVK+H  S       +F+A+  
Sbjct: 61  VYDGLVRFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGS-------NFDAEAV 113

Query: 125 IFMLERQWKESDPFFKVTSQNHSYFNDMGMPKLLKTVDRIDDYTVKIVLNQPEAPFLANL 184
            F  +R  K+  PF+  T      FN   +    K V+ +D++TV+  L++  APFL+NL
Sbjct: 114 KFNFDRMLKKDHPFYD-TGPFPLSFNFASV----KAVNVLDEHTVEFKLSEAFAPFLSNL 168

Query: 185 AMQYAGIQSKEYAIAMLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYWGGKAK 244
           A     I S    +A+ K G  ++  + P GTGPF  V++  +  +  +  P YW   AK
Sbjct: 169 AYPTGLIVSP---VAVEKHG--KEYGRSPSGTGPFKFVEWLSNQRVVVERNPDYWDSAAK 223

Query: 245 IDDLVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLNVGYLSYN 304
           +  +VF    DA+ R A++  G   VM    P +L    +D N  V EQ G +V +   N
Sbjct: 224 LQAVVFRPITDANTRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILN 283

Query: 305 TTKKPFDDVRVRKAINMAINKKAIIDGVYLTTGVAAKNPIPPTMWSYNDAVKDDPYDPEA 364
           T + PF D RVR+A N A+NK+ ++D V   T   A  PIPP       +V+   +DPE 
Sbjct: 284 TKQGPFADKRVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFNWVESSVEPYAHDPEK 343

Query: 365 AKKLLAQAGYPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKSFEWGEYR 424
           AK LLA+AG  +   T           +P     A  +QADL  +  K +I+++EW  + 
Sbjct: 344 AKALLAEAGVENPQVTFYVTEGGSGMLDPITMGAA--IQADLQAVGFKVKIETYEWNTFL 401

Query: 425 KRLQ---AGEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGSNISKFCYQPYEDLVVK 481
            R+     G+  M  + W     DPD   Y  L   +     G N   +     ++L+ K
Sbjct: 402 GRVNPGLEGKADMAEMAWM--TNDPDTVPYLTLRTDAMPDKGGFNSGYYSNPQLDELLEK 459

Query: 482 AKSTVKQADRDALYKKAQVIFKEQAPWFTIAHAVQLKPVRKEVVDFKLSPFGRHTFYGV 540
           A+ +  QA+R  LY + Q I  + APW  +A+  Q       V  FKL P      +GV
Sbjct: 460 ARRSTDQAERGKLYGEVQSIVHDDAPWLFVANWKQNAVTTAAVKGFKLQPSFLLDLHGV 518