Pairwise Alignments

Query, 344 a.a., Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  290 bits (741), Expect = 5e-83
 Identities = 145/299 (48%), Positives = 203/299 (67%), Gaps = 7/299 (2%)

Query: 29  PSHLRAVGDISFRIERGRTLAVVGESGCGKSTLARMVALIEKPTAGQLTLVGTDAVDTPA 88
           P  L+AV  ++ R+  G TL VVGESGCGKST AR +  + + T G++  +G D      
Sbjct: 37  PVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQE 96

Query: 89  ERKRELRQAVQLVFQNPYGSLNPRKKISAVLEDPL-AINTTMGKQERAAKAREMLARVGL 147
            ++R  R+ +Q++FQ+P  SLNPR  +  ++ +PL      + KQE   + +EM+A+VGL
Sbjct: 97  VKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQTFYPELSKQEVKDRVKEMMAKVGL 156

Query: 148 RPEYANRYPHMFSGGQRQRIAIARALMLNPRLLVADEPVSALDVSIQAQVLNLLADLQAE 207
            P   NRYPH FSGGQ QRI IARAL+L P++++ DEPVSALDVSIQAQV+NLL +LQ E
Sbjct: 157 LPNVINRYPHEFSGGQCQRIGIARALILKPKMIICDEPVSALDVSIQAQVVNLLKELQKE 216

Query: 208 LGLAYLFISHDLGVVRHIAHDVLVMYLGHAVEQGPKSRIFSRPLHPYTQALLAST----P 263
           LGL+ +FI+HDL VV+HI+  VLVMYLG+AVE G    +F+ P HPYT+AL+++     P
Sbjct: 217 LGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSKELFANPKHPYTKALMSAVPIPDP 276

Query: 264 GLSSQRIV--LKGELPSPLNPPAGCVFSTRCPHVAERCRQERPLPRMLDERLVACHYSE 320
            +   + +  L+G+LPSP+NPP+GCVF TRCP     C + +P+ +  D   V+C Y+E
Sbjct: 277 NIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAECAKTKPVIKGSDIHSVSCLYAE 335