Pairwise Alignments

Query, 342 a.a., Dipeptide ABC transporter, ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  293 bits (751), Expect = 3e-84
 Identities = 153/317 (48%), Positives = 212/317 (66%), Gaps = 3/317 (0%)

Query: 1   MPLLDIKDLHVEFPTQGGVLHAVDGVSLTLEEGEVLGIVGESGSGKSVTMMALMGLVGFP 60
           M LLD+KDL VEF TQ G++ AV+ ++ +L++GE LGIVGESGSGKS T+ A+MGL+   
Sbjct: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61

Query: 61  GRVRAEHMRFAGKELLGISDKARRSLVGKEVAMIFQEPTTSLNPCFTIGFQLMETLRLHL 120
           G++     +F GKE+L + ++    +  +++AMIFQ+P TSLNP   +  QLME L LH 
Sbjct: 62  GKITGS-AKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120

Query: 121 KLDKREAKRRATELLEQVGIPAASSRLGSYPHQLSGGMNQRVMIAMAIACNPRLLIADEP 180
            + K EA   +  +LE V IP A  R+  YPH+ SGGM QRVMIAMA+ C P+LLIADEP
Sbjct: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180

Query: 181 TTALDVTIQAQILDLLRDLQKERGMALVLITHNMGVVSEMAQRIAVMYAGQVMEHQRVDH 240
           TTALDVT+QAQI++LL +L++E   A+++ITH++GVV+    ++ VMYAG+ ME+  V+ 
Sbjct: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240

Query: 241 LFASPQHPYTEALLAALPERVAPEGR-LATISGMVPGVHDRPAGCLFAPRCSYVTERACH 299
           +F +P HPY E LL+A+P R+  EG  L TI G  P +   P GC +  RC  VT+R   
Sbjct: 241 IFYNPSHPYAEGLLSAIP-RLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKR 299

Query: 300 VRPALREWQGAEVRCHF 316
             P L  +  +  R  F
Sbjct: 300 EAPILLPFGNSRQRACF 316