Pairwise Alignments

Query, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Klebsiella michiganensis M5al

 Score =  431 bits (1109), Expect = e-125
 Identities = 211/336 (62%), Positives = 270/336 (80%), Gaps = 3/336 (0%)

Query: 1   MFRFILTRVSLLVPTFIGMTLLAFFLIRLVPGDPIETMAGERGIDPARHAELRTAYGFDK 60
           M +FIL R+ L++PTFIG+TLL F  + ++PGDP+  MAGERGI P RHA+L    G DK
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAEMGLDK 60

Query: 61  PVIVQYGIYIGRVLHGDLGKSIITQDTVMSEFLALFPATVELAVCAILFALLLGLPAGIL 120
           P+  QY  YI  V+HGDLG S+ ++  V  EF+  F AT+EL VCA++FA+++G+P G+L
Sbjct: 61  PMWQQYVNYIWGVMHGDLGISLKSRIPVWEEFVPRFKATMELGVCAMIFAIIVGIPVGVL 120

Query: 121 AAVRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYYIE---P 177
           AAV+R SIFDH  +  +LTGYSMPIFWWG++LI+  SVQL  TPVSGRI+   +++   P
Sbjct: 121 AAVKRGSIFDHTSVGLALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRISDTVFLDDTLP 180

Query: 178 ETGFLLIDSLRAGDTGAFWSALHHLILPAVVLGTVPLAVIARMTRSAMLEVLGEDYIRTA 237
            TGF+LID+   G+ G F  A+ H+ILPAVVLGT+PLAVI RMTRS+MLEVLGEDYIRTA
Sbjct: 181 LTGFMLIDTAIWGEPGDFIDAVMHMILPAVVLGTIPLAVIVRMTRSSMLEVLGEDYIRTA 240

Query: 238 RAKGLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGR 297
           RAKGL+R+RV+ +HALRNA++PVVTVIGLQVG L  GAILTETIFSWPG+G+WLI+A+ R
Sbjct: 241 RAKGLTRMRVIVVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQR 300

Query: 298 RDYPVLQGGMLLLGGIVMLVNLLVDVAYGVINPRIR 333
           RDYPV+QGG+LL+  +++LVNLLVD+ YGV+NPRIR
Sbjct: 301 RDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336