Pairwise Alignments

Query, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 345 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  266 bits (681), Expect = 4e-76
 Identities = 142/333 (42%), Positives = 209/333 (62%), Gaps = 3/333 (0%)

Query: 3   RFILTRVSLLVPTFIGMTLLAFFLIRLVPGDPIETMAGERGIDPARHAELRTAYGFDKPV 62
           R +  R+  +V T  G+ LL F + R++P DP+  + G    D + + ++    GFDK +
Sbjct: 13  RRLSKRLLQVVITLFGLLLLTFTIGRVMPIDPVLAIVGPDA-DQSTYQQVYQQLGFDKSL 71

Query: 63  IVQYGIYIGRVLHGDLGKSIITQDTVMSEFLALFPATVELAVCAILFALLLGLPAGILAA 122
             Q+GIY   +LHGDLG +++T   V+ + + +FPAT+ELA  AIL    LG+P G+LAA
Sbjct: 72  TTQFGIYFVNLLHGDLGNALLTGKPVVDDIIRVFPATMELATMAILVGAGLGIPLGVLAA 131

Query: 123 VRRNSIFDHGVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRI--AVQYYIEPETG 180
            RRNSI D+ V   SL GYS PIFW G++ +L F   LGW   +GR+   +   +   TG
Sbjct: 132 ARRNSISDYVVRIISLAGYSTPIFWVGMMGLLLFYAWLGWVGGAGRVDLGLDGIVPRRTG 191

Query: 181 FLLIDSLRAGDTGAFWSALHHLILPAVVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAK 240
            + +D+L AG+   FW+A++HLILPA +LG   LA I+RMTRS ML  L +++I TAR K
Sbjct: 192 LMTVDALLAGNGQVFWNAINHLILPASLLGFHSLAYISRMTRSFMLAQLSQEFIITARVK 251

Query: 241 GLSRLRVVGLHALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDY 300
           GL+  +V+  HA RN L+ ++TV+ L  G L  GA+L ET+FSWPG G +L  ++   D 
Sbjct: 252 GLTERQVIWNHAFRNILVQLLTVVALAYGALLEGAVLIETVFSWPGFGSYLTGSLLLGDM 311

Query: 301 PVLQGGMLLLGGIVMLVNLLVDVAYGVINPRIR 333
             + G +LL+G I +++NLL D+ Y   +PR +
Sbjct: 312 NAVMGCVLLVGVIFVMLNLLSDMLYQFFDPRTK 344