Pairwise Alignments

Query, 559 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  610 bits (1573), Expect = e-179
 Identities = 311/555 (56%), Positives = 396/555 (71%), Gaps = 5/555 (0%)

Query: 6   WLSSYPQGVPADIDASHYPSLVALMEESFSKYADRTAYSFMGKDISYGETDKQSKAFAAY 65
           W  + P  VPA IDA  Y SL+ L E S +KYAD+ A+  MG  ++Y + +++S+AFAAY
Sbjct: 5   WTKNLPHDVPAIIDAKQYSSLIDLFESSVAKYADQPAFVNMGATLTYRKLEERSRAFAAY 64

Query: 66  LQG-LGLVKGDRVAAMMPNCPQYPIAVAAILRAGLILVNVNPLYTPRELEHQLKDSGAKA 124
           LQ  L L KGDRVA MMPN  QYPIA+  ILRAG+++VNVNPLYTPREL+HQL DSGAKA
Sbjct: 65  LQNELKLQKGDRVAIMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLNDSGAKA 124

Query: 125 IIIMENFGTTLQQCIASTPIKHIVLASMGDRLGFLKGALVNYVVRNVKKLVPHFSLPGAV 184
           I+++ NF  TL+Q +  TP+K ++L  +GD L   K  LVN+VV+ +KK+VP + LP A+
Sbjct: 125 IVVVSNFANTLEQVVEQTPVKSVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHLPHAI 184

Query: 185 RFNDALDKGASGSVKPVAIGPDDVAVLQYTGGTTGVSKGAVLLHRNVIANVLQSEAWNEP 244
               +L KG         I  DD+A LQYTGGTTGVSKGA+L H N+++N+LQ++A   P
Sbjct: 185 SMRQSLSKGRRLQYVKPTIKGDDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADAAYSP 244

Query: 245 AMAKVPANEQPTGVCALPLYHIFAFTVGMMLSMRTGGKLILIPNPRDIPAVLKELSKHTI 304
            +A    + +   V ALPLYHIFA TV  +L +  G   +LI NPRDIPA + EL KH  
Sbjct: 245 LLA----DGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPRDIPAFVSELKKHPF 300

Query: 305 HSFPAVNTLFNGLANHPDFNTVNWKNLKISVGGGMAVQAAVAKLWLEKTGCPICEGYGLS 364
            +   VNTLFN L +  +F T+++ NLK+S+GGGMAVQ AVA  W   T   + EGYGL+
Sbjct: 301 TALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADKWQGITKTRLLEGYGLT 360

Query: 365 ETSPSTTCNPTNSTAYTGTIGLPLPGTWLKLLDDEGNEVPLGERGEIAIKGPQVMAGYWQ 424
           E SP  TC P N   Y G+IG P+  T +++ D+EGN +P GE GE+  KGPQVM GYWQ
Sbjct: 361 EASPLLTCCPYNLEGYNGSIGFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQ 420

Query: 425 RPDETAKVMTPDGYFKSGDIGVVDERGYFKVVDRKKDMILVSGFNVYPNEVEDVVALIPG 484
           RP+ETAKV+  DGY  +GDIG +DE+G+F +VDRKKDMILVSGFNV+PNEVE+VVAL P 
Sbjct: 421 RPEETAKVIDKDGYLATGDIGYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPK 480

Query: 485 VLECAAVGVPDEKTGEAVKLVIVKKDPSLTEAQVREYCRANLTGYKQPRIVEFRTEMPKT 544
           VLE AAVGVP E +GE VK+ +V KD SLTE QV ++CR +LTGYK P++VEFR E+PK+
Sbjct: 481 VLEVAAVGVPHEVSGELVKVFVVPKDKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPKS 540

Query: 545 PVGKILRRELRDSKK 559
            VGKILRRELRD  K
Sbjct: 541 NVGKILRRELRDEAK 555