Pairwise Alignments

Query, 559 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  218 bits (554), Expect = 6e-61
 Identities = 158/543 (29%), Positives = 262/543 (48%), Gaps = 36/543 (6%)

Query: 31  EESFSKYADRTAYSFMGKDI--SYGETDKQSKAFAAYLQGLGLVKGDRVAAMMPNCPQYP 88
           E+   K  DR    +  +++  +Y E D+++   A  L  +G+ KGD +     N P + 
Sbjct: 13  EKQAQKDPDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWL 72

Query: 89  IAVAAILRAGLILVNVNPLYTPRELEHQLKDSGAKAIIIMENFGTTLQQCIASTPIKHIV 148
             + A  + G++LV VN  Y   EL + +K S  KA+ I+++F       I    +  + 
Sbjct: 73  TFMFATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELK 132

Query: 149 LASMG----DRLGFLKGALVNYVVRNVKKLV---PHFSLPGAVRFNDALDKGASGSVKPV 201
            +  G    +   +LK  +  YV +   + +       L G    ++ L +   G     
Sbjct: 133 TSQRGKLNSEEFPYLKNVI--YVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKG----- 185

Query: 202 AIGPDDVAVLQYTGGTTGVSKGAVLLHRNVIAN---VLQSEAWNEPAMAKVPANEQPTGV 258
            +  DDV  +QYT GTTG  KG +L H+N++ N   + + + + E     +P        
Sbjct: 186 -LDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLP-------- 236

Query: 259 CALPLYHIFAFTVGMMLSMRTGGKLILIPNPRDIPAVLKELSKHTIHSFPAVNTLFNGLA 318
             +PL+H F   +G++  +  GG L+++    D   VL  + K    +   V T+F    
Sbjct: 237 --VPLFHCFGIVLGVLALLTHGGTLVML-EIFDPLLVLAAIQKEKCTAVYGVPTMFIAEF 293

Query: 319 NHPDFNTVNWKNLKISVGGGMAVQA-AVAKLWLEKTGCPICEGYGLSETSPSTTCNPTNS 377
           +HP F   +  +L+  +  G      A+ K+  +     I   YGL+E SP  T    + 
Sbjct: 294 SHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDD 353

Query: 378 T--AYTGTIGLPLPGTWLKLLDDE-GNEVPLGERGEIAIKGPQVMAGYWQRPDETAKVMT 434
                  ++G  +P   +K++D E G  +  G  GEI  +G  VM GY++ P++TA+V+ 
Sbjct: 354 PFEKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIE 413

Query: 435 PDGYFKSGDIGVVDERGYFKVVDRKKDMILVSGFNVYPNEVEDVVALIPGVLECAAVGVP 494
            DG+  SGD+ V DE GY+K+V R KDMI+  G N+YP E+E+ +  +PG+ +   VG+P
Sbjct: 414 KDGWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIP 473

Query: 495 DEKTGEAV-KLVIVKKDPSLTEAQVREYCRANLTGYKQPRIVEFRTEMPKTPVGKILRRE 553
           DEK GE V   VI K+   + E  VR++    +  YK P+ V    E P T  GKI + +
Sbjct: 474 DEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFK 533

Query: 554 LRD 556
           L +
Sbjct: 534 LTE 536