Pairwise Alignments

Query, 528 a.a., Altronate dehydratase (EC 4.2.1.7) from Variovorax sp. SCN45

Subject, 501 a.a., D-arabinoate dehydratase (EC 4.2.1.5); also involved in L-fucose catabolism (from data) from Sinorhizobium meliloti 1021

 Score =  453 bits (1165), Expect = e-132
 Identities = 246/500 (49%), Positives = 312/500 (62%), Gaps = 10/500 (2%)

Query: 28  IRLDPKDNVVVARMEVPAGTPVPAEGVTTLQAVPAGHKMATRAIAKGAPVLKYNTVIGFA 87
           I L P DNVVVA   +  G  + A GV+ +  +  GHK A R I  G PV+KY   IG A
Sbjct: 7   ILLSPDDNVVVATAAIAPGDRL-AGGVSAVARIEPGHKAAIRRIDVGEPVVKYGQAIGRA 65

Query: 88  SEDLPAGTWMHSHNIAFGDLVKDYRHGLDYA-PTVLLSPGDRAR-FHGIVRADGRVATRN 145
           +  +  G  +HSHN+AF       R  +  A P    S  D+AR F G  RADGR ATRN
Sbjct: 66  TSPIAPGEHVHSHNLAFDQ----GRLAVGAAVPPEAASEADKARTFLGYRRADGRAATRN 121

Query: 146 YIGVFIVSHSGATVARQIARFFDADELAAYPHVDGVVPYIHEQGSGMERSGEPMDMLRRT 205
           YIG+    +   TV R IA   +   L  Y  +DG VP +H+QG GM  +G+ M  L RT
Sbjct: 122 YIGIVASVNCSTTVCRAIADEANRRILPKYEGIDGFVPIVHDQGCGMSSTGDGMKNLHRT 181

Query: 206 IGGYVKHPNTAGALVIALGQEHNELEAFLEHQGLVRGPMLQTLVIQDAGGTKKAIAAGIE 265
           + GY +H N  G L++ LG E N+L  + +      G   +   IQ+AGG+++++   + 
Sbjct: 182 LAGYARHANFGGVLMVGLGCEVNQLTLYGQSGA---GAEKRHFNIQEAGGSRRSVERALG 238

Query: 266 IVRAMLPQADTARRESVSAEHIMVGMQCGGSDGFSGLSANPALGAAMEILIRNGGTAILS 325
           I+  +  +   ARR  +    I+VG+QCGGSDG SG++ANPALGAA++IL   GGTAILS
Sbjct: 239 ILDEIAKEVAAARRVPIPVSEIIVGLQCGGSDGLSGITANPALGAAVDILAAAGGTAILS 298

Query: 326 ETSEIYGVEHTLTARARTPEIGQKLVARIDWWLEYNKGRDTQINGQVSPGNNAGGLANVL 385
           ETSEIYG EH L +RA    +  KL   I WW +Y       ++   SPGN  GGL  +L
Sbjct: 299 ETSEIYGAEHLLRSRAVNETVAVKLDGLIAWWEDYVAMHGASLDNNPSPGNKRGGLTTIL 358

Query: 386 EKSLGGAKKGGNAPLMEVYEYAQPVTQHGLVFMDTPGYDPVSATGQIAGGANLICFTTGR 445
           EKSLG   KGG +PL  VY YA+ VT+ GLVFMDTPGYDPVSATGQ+AGGAN+I FTTGR
Sbjct: 359 EKSLGAVAKGGRSPLTAVYNYAERVTEPGLVFMDTPGYDPVSATGQVAGGANVIAFTTGR 418

Query: 446 GSCFGSVPSPTIKLASNTPMYARMEPDMDINCGPVIDGDATIADMGQRIFEQVLRHASGE 505
           GSCFG  P+P+IKL SNT +Y  ME DMDI+CG +  G+ TIAD+G+ IFE ++  ASG 
Sbjct: 419 GSCFGCRPAPSIKLTSNTALYRAMEEDMDIDCGVIASGETTIADLGRGIFELIIETASGR 478

Query: 506 KTKSEALGVGLNEFVPWPLG 525
           KTKSE  G G NEFVPW LG
Sbjct: 479 KTKSELFGYGDNEFVPWHLG 498