Pairwise Alignments

Query, 427 a.a., HtrA protease/chaperone protein from Variovorax sp. SCN45

Subject, 456 a.a., serine endoprotease DegQ from Vibrio cholerae E7946 ATCC 55056

 Score =  207 bits (526), Expect = 7e-58
 Identities = 134/379 (35%), Positives = 206/379 (54%), Gaps = 18/379 (4%)

Query: 46  RDLASGLIIRSD-GLILTSAHVVANVDEVRVQLDDGRRFTARVAGSDRRTDVALLKID-A 103
           R L SG+II +D G ++T+ HV+   +++RV+L DGR F A + G D  +DVALLK++ A
Sbjct: 90  RGLGSGVIINADKGYVVTNYHVINGAEKIRVKLYDGREFDAELVGGDEMSDVALLKLNKA 149

Query: 104 TDLPVAVIGDSSALAPGEWVAAIGSPFGFHGSVTAGVVSAVGRVMAGAGEIP-FIQTDVA 162
            +L    I DS  L  G++  AIG+PFG   +VT+G+VSA+GR          FIQTD A
Sbjct: 150 KNLTEIRIADSDKLRVGDFAVAIGNPFGLGQTVTSGIVSALGRSGLNIENFENFIQTDAA 209

Query: 163 INPGSSGSPLLNSRGEVVGINSMIYSGSGGYMGLSFAVPIDLSMRIAGELLAHGTVHRAY 222
           IN G+SG  L+N  GE++GIN+ I   +GG +G+ FA+P ++   +  ++L  G V R  
Sbjct: 210 INSGNSGGALVNLNGELIGINTAILGPNGGNVGIGFAIPSNMMKNLTDQILEFGEVKRGM 269

Query: 223 LGAEFQEMTPALAQSFGLPAPTGALVVRVEADSPAESAGLAQGDAVLALDGKPVARFLDL 282
           LG +  E+T  LA + G  +  GA V +V  DS A+ AG+  GD + +L+GK +  F +L
Sbjct: 270 LGVQGGEITSELADALGYESSKGAFVSQVVPDSAADKAGIKAGDIITSLNGKKIDTFSEL 329

Query: 283 PQQIAQRPPGSRMQLEVWRHGAPRVLRATLAVQPAAASRAFTTAAPEWNDGL-GLSLGVL 341
             ++A    G  + L V R G  + +  TL  Q  A      T A   + GL G  L   
Sbjct: 330 RAKVATLGAGKTITLGVLRDGKNQNIDVTLGEQQNA-----KTKAESLHQGLSGAELSNT 384

Query: 342 SPAQRLQLHIDSGLMVREAD--GLARSEGILAGDVVVAMNTTKLYRVEDLGQALARVPAG 399
           + +  +Q     G+ V E      A S  +   D+++ +N  ++  + +L   + + P  
Sbjct: 385 TDSDPIQ-----GVKVTEVQKGSAAESYQLQKDDIIIGVNRKRVKNIAELRAIMEKSP-- 437

Query: 400 NTVALLVMRDRRLAYVAVR 418
           N +AL + R  R  Y+ VR
Sbjct: 438 NILALNIQRGERTLYLVVR 456



 Score = 38.1 bits (87), Expect = 6e-07
 Identities = 20/67 (29%), Positives = 36/67 (53%)

Query: 361 DGLARSEGILAGDVVVAMNTTKLYRVEDLGQALARVPAGNTVALLVMRDRRLAYVAVRLP 420
           D  A   GI AGD++ ++N  K+    +L   +A + AG T+ L V+RD +   + V L 
Sbjct: 301 DSAADKAGIKAGDIITSLNGKKIDTFSELRAKVATLGAGKTITLGVLRDGKNQNIDVTLG 360

Query: 421 AARHGRS 427
             ++ ++
Sbjct: 361 EQQNAKT 367