Pairwise Alignments

Query, 804 a.a., DNA polymerase II (EC 2.7.7.7) from Variovorax sp. SCN45

Subject, 785 a.a., DNA polymerase II from Klebsiella michiganensis M5al

 Score =  892 bits (2305), Expect = 0.0
 Identities = 441/783 (56%), Positives = 568/783 (72%), Gaps = 4/783 (0%)

Query: 22  GFILTRHWRDASSGTEIEYWLATDEGPRKAVLRSQTSVAFVESRHRPALEAQLAAMPGMQ 81
           GF+LTRHWRD   GTE+ +WLATD+GP +  L  Q SVAF+    RP +E  L    G +
Sbjct: 7   GFLLTRHWRDTPQGTELTFWLATDDGPLEVTLPPQESVAFIAESQRPQVERLLQGENGHR 66

Query: 82  VRELELKTFNCQPVVGVYAKHYRQLGRLTRALQPQGVPVLEADVRPHDRYLMERFITAGV 141
           +  L L+ F+ QPV G+Y + +RQL RL + L+  GV V E D+RP +RYLMERFITA V
Sbjct: 67  LAALNLQDFHRQPVFGLYCRAHRQLMRLEKKLRENGVTVYEGDIRPPERYLMERFITAPV 126

Query: 142 TVEEGRADGATIVDCRLKPAPEFRPVLKMVSLDIETSQDEALYSIALDGLQDRVVFMLGE 201
            VE G A G  +V+ R+KP P +RP LK VSLDIETS+   LY I L+G   RVV+MLG 
Sbjct: 127 WVE-GEARGQQLVNARMKPNPHYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGP 185

Query: 202 APPGPGEPMDFSLVYCPTRKAMVESLNDWFERNDPDVVIGWNVIQFDLRVLQKTANDCGM 261
            P  P   +DF+L Y  +R  ++E LN WF  +DPDV+IGWNV+QFDLRVLQK A    +
Sbjct: 186 EPATP-PAVDFTLEYVASRPLLLEKLNAWFAAHDPDVLIGWNVVQFDLRVLQKHAERYRI 244

Query: 262 QLLLGRERRPIEWRTHPGKQGYLFAPTPGRVIIDGIDALKAAMWSFPSFSLETVSQALLG 321
            L+LGR    +EWR H  K G  FA   GR+IIDGI+ALK+A W+F SF+LE+V++ LLG
Sbjct: 245 PLMLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIEALKSAFWNFSSFALESVARELLG 304

Query: 322 EGKAIGDEYDKMAEIERRYQEDKPALALYNIRDCELVLRIFDKAKLLQFVMERAQTTGLQ 381
           EGKAI + +D+M EI+RR+  DKPALA YN++DCELV RIF K +++ F++ERA   GL 
Sbjct: 305 EGKAIDNPWDRMDEIDRRFHHDKPALATYNLQDCELVTRIFHKTEIMPFLLERATVNGLP 364

Query: 382 ADHFGGSIAAFSHHYLPRMHRLGYVAPNVGEIASKAFPGGYVMDSKPGFYDSVVVLDYKS 441
           AD  GGS+AAFSH Y PRMHRLGYVAPN+G +  +A PGGYVMDS+PG YDSV+VLDYKS
Sbjct: 365 ADRHGGSVAAFSHLYFPRMHRLGYVAPNLGAVPPQASPGGYVMDSRPGLYDSVLVLDYKS 424

Query: 442 LYPSIIRTFLVDPVGLVEGTHAGDPAMVVKGPQGTVFSRERHCLPEIVTTLWRARDEAKR 501
           LYPSIIRTFL+DPVGLVEG    D A   +G  G  FSRE+HCLP IV  +W  RDEAK+
Sbjct: 425 LYPSIIRTFLIDPVGLVEGLAHPDDAHSTEGFLGARFSREKHCLPGIVGQIWHGRDEAKQ 484

Query: 502 VGNEPLSQALKLLMNSFAGVLGAADCRFFNPKLVSAVTLRGHEMMKLTREFVQSRGYEVI 561
             N+PLSQALK++MN+F GVLG + CRFF+P+L S++T+RGH +M+ T+  ++S+GY+VI
Sbjct: 485 HKNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIESQGYDVI 544

Query: 562 YGDTDSIFVWLKRTHTNEEAHAVAANLVRDINDWWTGSLRDEQGLDNFLEIEFDTHYRKF 621
           YGDTDS FVWLKR H++EEA ++  +LV  +N+WW   L  + GL + LE+EF+TH+ +F
Sbjct: 545 YGDTDSTFVWLKRAHSDEEASSIGRSLVAFVNEWWAAELA-KDGLASTLELEFETHFCRF 603

Query: 622 FMPTIRGSDVGSKKRYAGLSVDAKGKEEMVYRGLEMARSDWTPLARQFQEGLLSRIFQGE 681
            MPTIRG+D GSKKRYAG+  +A  ++ MV++GLE  R+DWTPLA+QFQ+ L  RIF+ +
Sbjct: 604 LMPTIRGADTGSKKRYAGMIQEA-DEQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRHQ 662

Query: 682 PYKEFVSDYAQSTLAGEKDDLLIYRKRLRHRLDAYLVNVPPQVRAARIADEYNARIGRPM 741
           PY+++V +     + GE DD L+YRKRLR  L  Y  NVPP VRAAR+ADE N R+GRP 
Sbjct: 663 PYRDYVRETIDKLMNGELDDRLVYRKRLRRPLAEYQRNVPPHVRAARLADEQNVRLGRPQ 722

Query: 742 QYQSGGWIRYVMTRNGPEPLETRHSRIDYEHYLSKQLQPIADAILQPVGESFTALTTAQQ 801
           QYQ  G I+YV T  GPEP++ + S +DYEHYLSKQL+P+A+ IL  V + F  + T Q 
Sbjct: 723 QYQQRGSIKYVWTTGGPEPVDYQQSPLDYEHYLSKQLEPVAEGILPFVDDDFATIVTGQL 782

Query: 802 HLF 804
            LF
Sbjct: 783 GLF 785