Pairwise Alignments

Query, 264 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 283 a.a., ABC transporter permease protein from Phaeobacter inhibens DSM 17395

 Score =  132 bits (333), Expect = 6e-36
 Identities = 81/253 (32%), Positives = 131/253 (51%), Gaps = 3/253 (1%)

Query: 10  GRVARGWGVVAAQVAAALALLAAWEGAVRAGAVSALYLPAPSAIFESFVPMLMRGQLLHH 69
           G   RG   V A V   L +LA  E   R G +S L LP PS +  +   +   G L  H
Sbjct: 33  GFAPRGARWVGALVFVLLLVLA--ELGTRQGWISNLTLPRPSDVLATLGELYASGLLWTH 90

Query: 70  TGVTLAEFAVGYAAAVVAGIGFGVLLVLTPAAERFAQPFVAALMSVPKVAIVPLLALWLG 129
             V+L+   VG A     G+G GV++ L         P VAAL  +PK+A++PL  +W G
Sbjct: 91  VSVSLSRLVVGAALGASVGVGVGVMIGLFSYVRAGLVPLVAALFPIPKIALLPLFVIWFG 150

Query: 130 IGFSHKVAIVFLFSVFQILYSTIAGIKQTRREHLKVARAFRASTLQTVWKVILPSAVPTI 189
           I  + K A++   +    + +T   +    R  +++ ++F  S L  V K++LP A+P I
Sbjct: 151 IDEASKYALIAFGTFTPTVVATYGAVDNVDRTLIRMGQSFNLSWLSIVRKIVLPGAMPGI 210

Query: 190 FAALRVSASVGLVGALFAEMLSSKEGLGNLITRSTASLDTAETFALIVLVTVLAVAMIAA 249
            + LR+S ++ ++  + AEML ++ G+G  I  + +  D    FA + +++VL V + + 
Sbjct: 211 LSGLRISLAIAIILLVAAEMLGAEHGIGAYILEAGSLYDLERLFAGVAILSVLGVLVSSL 270

Query: 250 LDLLERLLFLRWR 262
           +  +ER L LRWR
Sbjct: 271 IGQVERRL-LRWR 282