Pairwise Alignments

Query, 282 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  133 bits (335), Expect = 4e-36
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 7/281 (2%)

Query: 1   MSAEAELRAVLQRQDPAPTRAPLPWRRIAARATDAALPWLLPVALVALWFAGADRGWISA 60
           MS +   R+++        +A    RR  A A      + L +A +ALW A +  GWI+ 
Sbjct: 1   MSLQELDRSIIHEGGSVSAKADEYLRRSGAAAGSWLSRYGLLIAFLALWQAASTAGWINP 60

Query: 61  QVLPPPQFVWDTLRDLATSGDLWLHVSTSFTRVGVGFIAGTLLGLALGSAMGLSHRFEAY 120
            V P    +   L    + G L   ++ S  R G  F+   +L + LG  MG     E  
Sbjct: 61  AVFPSVGAILSALWTGISGGALLDDIAISLQRSGTAFVGAVVLAIPLGLLMGQVRAIENA 120

Query: 121 VLPTFNALVQIPVLAWLPFVLLIVGIGEPLKYILIAKAALVPVALNTLQGFRQTPVALRE 180
           + P      Q   LA  P  +L++G+GE  K  +I  A L P+ L+T+ G ++    L E
Sbjct: 121 LDPVLQLFRQTSALALYPVFILLLGLGEASKVFVIFWATLFPLLLSTISGVKEVDSKLIE 180

Query: 181 VGQVYGYSRRQQVMEIVLPHAVPTLFTGVRLGFTKAWLSLVVVELVASSEGLGYLIVYGR 240
           + +VYG SR      +VLP AVP++F G+RL  T A L L+  E++ +++G+G+ ++  +
Sbjct: 181 MARVYGASRLTVFRRVVLPGAVPSIFVGLRLSATTALLLLIASEMIGANKGIGFQVMNAQ 240

Query: 241 QLFQLDLVMAAVIVVGAIG----YAI---DRLLDRLETAAN 274
             FQ+ L+ AA+ ++  +G    YA+    R L R   A+N
Sbjct: 241 YNFQIPLMFAAIFILAGLGLVSNYALVFAQRRLCRWSDASN 281