Pairwise Alignments

Query, 278 a.a., KEGG: peptide/nickel transport system ATP-binding protein from Variovorax sp. SCN45

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  201 bits (511), Expect = 3e-56
 Identities = 116/266 (43%), Positives = 162/266 (60%), Gaps = 6/266 (2%)

Query: 5   PLLQVQDLVARHALAGVPAFGGLVKRKRWLQAVDGVSFTLARGEALGLVGESGCGKSTLV 64
           PLL+V+++  R     V        R+ ++QA + VSF +  GE  GLVGESG GKST+ 
Sbjct: 301 PLLKVENVNLRF----VTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIA 356

Query: 65  SLLARLSDPVSGRIVFDGTDLAGHPAASAARAPWRRRVQMVFQDPHDSLDPRGTAFDAIA 124
            ++A L  P +GR+ F+G DL    +    R P RR++QMVFQ+P+ S++PR   FD IA
Sbjct: 357 RVIAGLYQPNAGRVTFEGIDLTALKSEHERR-PLRRQMQMVFQNPYTSMNPRMKIFDIIA 415

Query: 125 APIR-GLMGLDAGAVRSRVLEMAQRVQLGPDLLQRRPHELSGGQAARVGIARALGPGPEL 183
            PIR   +       R  V ++ + V LG     + PHE SGGQ  R+ IARAL   P L
Sbjct: 416 EPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRL 475

Query: 184 LILDEPTAALDVSVQAGVLALLDRLRRELGLAIVFVSHDLGVVRLLCERVLVMREGRIVD 243
           LI DEPT+ALDVSVQA +L LL  L+ EL L ++F+SHDL V+R +C+RV VM+ G +++
Sbjct: 476 LICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLE 535

Query: 244 QGPAGELLDRPAHAYTAALVAAIPRF 269
             P  +L   P H Y+  L++ +P F
Sbjct: 536 VAPTEQLFTDPQHEYSKKLISLMPEF 561



 Score =  147 bits (371), Expect = 5e-40
 Identities = 91/249 (36%), Positives = 139/249 (55%), Gaps = 8/249 (3%)

Query: 36  AVDGVSFTLARGEALGLVGESGCGKSTLVSLLARLSDP----VSGRIVFDGTDLAGHPAA 91
           AV  ++  + RGE +G+VGESG GKST+ + +  L  P      G +  +G  ++G  + 
Sbjct: 22  AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGTIAGGEVYLNGEKISGL-SP 80

Query: 92  SAARAPWRRRVQMVFQDPHDSLDPRGTAFDAIAAPIRGLMGLDAGAVRSRVLEMAQRVQL 151
            A R     ++  +FQDP  SL+P  T    +   I   M + A     R L + ++V +
Sbjct: 81  QAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQVSAEEAYQRALSLMKQVGI 140

Query: 152 GP--DLLQRRPHELSGGQAARVGIARALGPGPELLILDEPTAALDVSVQAGVLALLDRLR 209
               + L++ PH+ SGG   RV IA AL   P+L+I DEPT ALDVS+Q  +L L+  L 
Sbjct: 141 PQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELC 200

Query: 210 RELGLAIVFVSHDLGVVRLLCERVLVMREGRIVDQGPAGELLDRPAHAYTAALVAAIPRF 269
           ++  +  + V+HD+GVV  + +RV VM  G +V+ GP  ++L  P H YT +L++A+PR 
Sbjct: 201 KKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPYTRSLISAVPR- 259

Query: 270 PDRPSAFFP 278
            DR    FP
Sbjct: 260 SDRKLDRFP 268