Pairwise Alignments

Query, 311 a.a., Uncharacterized methyltransferase PA1407 from Variovorax sp. SCN45

Subject, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 9/164 (5%)

Query: 68  SQLAPGETLHWVFQCRHEGQSSTQLMGGSVPDPHWVTEEGARYRVNVGRGQNHGLFLDMA 127
           S++   ET++ V   +      T++ G        ++E  A++ VN+ +G   G FLD  
Sbjct: 138 SEITDVETMY-VQSGKKGSDVKTKIFGDKSQIETVISEGNAKFNVNM-KGHKTGFFLDQR 195

Query: 128 EGRRWVRAFVKARPDARSRVKVLNLFAYTCAFSVVALQAGARHVTNLDMSKGALAVGQQN 187
           + R  +  +VK         KVL++ +YT  F+V A   G   VT +D+S+ ALAV ++N
Sbjct: 196 DNRIDLENYVKPGD------KVLDICSYTGGFAVHAGIKGGE-VTAVDLSEKALAVAEEN 248

Query: 188 HRVNGVLAGASFLPHDLFSSWGKITRGGPYGLVIVDPPSYQKGS 231
             +N V      + +   +    I     + +V++DPP++   S
Sbjct: 249 MELNRVKNYNCMVSNAFDAMKEMIKNNEKFDVVVLDPPAFTDSS 292