Pairwise Alignments

Query, 338 a.a., AraC-type DNA-binding domain-containing proteins from Variovorax sp. SCN45

Subject, 347 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  147 bits (372), Expect = 3e-40
 Identities = 102/336 (30%), Positives = 164/336 (48%), Gaps = 11/336 (3%)

Query: 3   ERATVPVSFLRDMLTGARRQLRAQDIDAIATQAGISPLLLRQGAARVTREQFVRMYEGVA 62
           ER  +   F+ D L   RR     D   +  QAG+  ++       V+  Q+   +  VA
Sbjct: 2   ERRMIAPCFMDDTLECLRRH--GVDAGPLLAQAGLPSIV----TGPVSANQYGAFWHAVA 55

Query: 63  LFMGDEMLGLWSRPIRAGALKYLGLSLLDAPSLMVAMYRFTRFWNLLLDDYRLRMARANG 122
             M DE  G  +RP+RAG+   L  ++L   +L  A+ R  RF  ++L++    +   NG
Sbjct: 56  QAMDDEFFGEGARPMRAGSFALLCHAILSTATLEHALRRALRFLRVVLENPHGELVVENG 115

Query: 123 VATVTIAPRLDGTTPTPFGHELMVKLIHGVASWLVGRQLPVLEVGFAFRRPARFDEYANL 182
           +A + +     G T + F +     ++HGV  WL+GR+LP+  V F    P    +Y   
Sbjct: 116 LAQIVLKDA--GATRSAFAYRTFWIILHGVNCWLIGRRLPIRWVDFRCSAPPAGTDYRLF 173

Query: 183 FPGPVRFGQAASSVSFSEAVLRQTFRRTRGELLDFVRRAPDDWIFVTFDHDTTRSS-VRD 241
           F  PV F Q  + + F    L+    R    L  F+R AP + I V + HD   S+ +R 
Sbjct: 174 FGAPVHFDQRRTRLVFDAEYLKLPPIRDERALKHFLRHAPAN-ILVRYRHDAGLSAAIRQ 232

Query: 242 FVAARLATGVTLGDA-ATSLHMSERALSRKLASEGTSFRAVKEEVRRDVAIQRLVKTREP 300
            + A   +     +A A  + ++   L R+L  EG ++R++KE++RR +A++ L   R  
Sbjct: 233 RLHATAPSAWPGFEAIAARMRIAAPTLRRRLRQEGQTYRSIKEDLRRALAMEALADGRTN 292

Query: 301 IDLIAASVGFDNTPAFHRAFRTWTGSTPRGYRLRAS 336
           +  +A  +GF    AFHRAFR WTG +P  +R  A+
Sbjct: 293 VAQLAVELGFSEPSAFHRAFRKWTGKSPAQFRRNAT 328