Pairwise Alignments

Query, 338 a.a., AraC-type DNA-binding domain-containing proteins from Variovorax sp. SCN45

Subject, 345 a.a., transcriptional regulator, AraC family protein from Marinobacter adhaerens HP15

 Score = 70.9 bits (172), Expect = 5e-17
 Identities = 75/311 (24%), Positives = 125/311 (40%), Gaps = 15/311 (4%)

Query: 31  IATQAGISPLLLRQGAARVTREQFVRMYEGVALFMGDEMLGL-WSRPIRAGALKYLGLSL 89
           + + +GI P +L      +T EQF  +     +  GD  LGL + + ++      L  + 
Sbjct: 35  LLSASGIRPSMLGHPDNFITVEQFSALCRETLVQSGDPALGLEFGKRLKFTTHGSLAQAA 94

Query: 90  LDAPSLMVAMYRFTRFWNLLLDDYRLRMARANGVATVTIAPRLDGTTPTPFGHELMVKLI 149
           +   +L  A+    +++ +      L        A + +           F  ++++  +
Sbjct: 95  ISCDTLEQALTVLIKYFQIRFVYMSLSFFVEEHEAVIQLDLAHSIEDLYRFNVDVVMASL 154

Query: 150 HGVASWLVGRQLPVLEVG---FAFRRPARFDEYANLFPGPVRFGQAASSVSFSEAVLRQT 206
             V   L G +L  L+ G     F  P     Y  LF   + FG   + + F    L   
Sbjct: 155 MDVNLLLFGHRL--LDGGRCLLDFPEPEDLSAYRQLFGSQIAFGSGVNQLRFKRVFLDSP 212

Query: 207 FRRTRGELLDFVRRAPDDWIFVTFDHDTTRSSVRDFVAARLATGVT-----LGDAATSLH 261
              +        RR  +             +SV D V   L TG +     L D A  L 
Sbjct: 213 MSLSN----PVTRRIAEAQCQEEMRFIEGSTSVSDRVVRLLETGRSQRLPALEDVAEHLK 268

Query: 262 MSERALSRKLASEGTSFRAVKEEVRRDVAIQRLVKTREPIDLIAASVGFDNTPAFHRAFR 321
           MS R L R+LASEG  F+ +++ +R   A++ L +    ID IA ++G+ +   F RAFR
Sbjct: 269 MSTRTLRRQLASEGVRFQQLQDSIRHRRALELLRRNELSIDEIADALGYSDPSNFGRAFR 328

Query: 322 TWTGSTPRGYR 332
            W G +P  +R
Sbjct: 329 KWEGVSPSAWR 339