Pairwise Alignments

Query, 367 a.a., D-amino-acid oxidase (EC 1.4.3.3) from Variovorax sp. SCN45

Subject, 421 a.a., D-amino acid dehydrogenase small subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 67.0 bits (162), Expect = 9e-16
 Identities = 102/421 (24%), Positives = 151/421 (35%), Gaps = 99/421 (23%)

Query: 4   DAIVIGAGIVGAACAHALAQAGLRVLVLDARIGGATGAGMGH------------------ 45
           + +V+G+G+VG   A  LAQAG  V V+D +  GA      +                  
Sbjct: 3   EVLVLGSGVVGLTSAWYLAQAGHDVTVVDRQPRGAEETSFANAGQISYGYSSPWAAPGIP 62

Query: 46  ------------------------LVVMDDNAAELELSRRSVAQWRALA-PRMGEDC--- 77
                                   L  M       +LSR  V + R LA      +C   
Sbjct: 63  QKALKWMLEKHAPLKIQPSLDPALLSWMGKMLLNCQLSRYQVNKSRMLAIANYSRECLKA 122

Query: 78  ---AYS------PCGTLWIAANAEEMAEAERKQQRLHAHGIDGRLLTASGLARAEPAL-- 126
               YS        GTL +  + +++   E+  Q L   G+   LL  +     EP L  
Sbjct: 123 LNQTYSLDYQGRQRGTLQVFRDEKQLTAIEKDMQLLAQSGVRFELLNVAQCLTHEPGLAP 182

Query: 127 -RKGLAGALEVP----GDGILYAPNAARWLLAQAA--------DAVRVEHAKVAAIQDDG 173
            ++ L G L +P    GD  L+          Q            +  E  K+  +Q D 
Sbjct: 183 VQEKLVGGLWLPDDETGDCYLFCQQLTELAKQQGVRFHFDCHIQQLVCEGKKIIGVQTDL 242

Query: 174 TLRLADGSRRSAPRIVLANGIEATALCP----ELPIRPKKGHLL---ITDRYPGTVHHQL 226
            L  AD         V+A G  +T+L      E+P+ P KG+ L   I D         +
Sbjct: 243 GLLKADA-------YVVALGSYSTSLLKPLGIEIPVYPVKGYSLTLPIIDEKFAPQSTVM 295

Query: 227 VELGYVTSAHHSDGDSVAFNVQPRPTGQLLVGSSRQFDTTDPAVEAPMLARMLQRTLDYL 286
            E   V     SD              ++ V  + +    DPA+     A +     D  
Sbjct: 296 DETYKVALTRFSD--------------RIRVAGTAELAGFDPAIPEARKATIEMVARDLF 341

Query: 287 PGLANLNAVRSWTGMRAASPDGLPLLGRHPWREKLWLAVGHEGLGVTTAPGSAHLLAALM 346
           P   +    + WTG R  +PDG P++G  P+   L+   GH  LG T A GSA +LA ++
Sbjct: 342 PHGGDFAKGQFWTGFRPMTPDGTPIIGATPY-TNLYTNTGHGTLGWTMACGSASILADVL 400

Query: 347 T 347
           T
Sbjct: 401 T 401