Pairwise Alignments

Query, 476 a.a., ATP-dependent 23S rRNA helicase DbpA from Variovorax sp. SCN45

Subject, 634 a.a., ATP-dependent RNA helicase DeaD from Enterobacter sp. TBS_079

 Score =  268 bits (684), Expect = 5e-76
 Identities = 143/338 (42%), Positives = 209/338 (61%), Gaps = 1/338 (0%)

Query: 17  FAALALSPQMLANLTQLGYTQMTPIQAAALPPALLGKDLIAQAKTGSGKTAAFALALLAN 76
           FA L L   +L  LT LGY + +PIQA  +P  L G+D++  A+TGSGKTAAF+L LL N
Sbjct: 8   FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLHN 67

Query: 77  LNARRFAIQAMVLCPTRELADQVTTEIRRLARAEENIKVVTLCGGVALRGQVASLEHGAH 136
           ++    A Q +VL PTRELA QV   +   ++    + VV L GG     Q+ +L  G  
Sbjct: 68  IDPELRAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQ 127

Query: 137 IVVGTPGRIMDHLERENLDLSALNTLVLDEADRMLDMGFFDDIVTVARQCPKERQTLLFS 196
           IVVGTPGR++DHL+R  LDLS L+ LVLDEAD ML MGF +D+ T+  Q P+  QT LFS
Sbjct: 128 IVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFS 187

Query: 197 ATYPEGIAKLAQQFMKNPEQITVQAQ-HEGSKIRQRWYQIKDSERLHAVSLLLDHFRPVS 255
           AT PE I ++ ++FMK P+++ +Q+       I Q ++ +    +  A+   L+     +
Sbjct: 188 ATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFLEAEDFDA 247

Query: 256 TLAFCNTKQQCRDLVDVLQAQGFSALALFGELEQRERDQVLVQFANRSCSVLVATDVAAR 315
            + F  TK    ++ + L+  G+++ AL G++ Q  R+Q L +  +    +L+ATDVAAR
Sbjct: 248 AIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAAR 307

Query: 316 GLDISQLEAVINVDVTPDSEIHIHRVGRTGRVGQQGAA 353
           GLD+ ++  V+N D+  DSE ++HR+GRTGR G+ G A
Sbjct: 308 GLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRA 345



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 11/95 (11%)

Query: 91  PTRELADQVTTEIRRL-ARAEENIKVVTLCGGVALRGQVASLEHG------AHIVV---- 139
           P RE  D    E+ R+    ++ ++V  + G +A  G ++S   G      +H  +    
Sbjct: 483 PRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPK 542

Query: 140 GTPGRIMDHLERENLDLSALNTLVLDEADRMLDMG 174
           G PG ++ H  R  +    +N  ++ +A    D G
Sbjct: 543 GMPGEVLQHFTRTRILNKPMNMQLMGDAQPRTDRG 577