Pairwise Alignments

Query, 485 a.a., Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) from Variovorax sp. SCN45

Subject, 488 a.a., regulatory protein GntR (NCBI) from Rhodospirillum rubrum S1H

 Score =  314 bits (804), Expect = 5e-90
 Identities = 205/463 (44%), Positives = 254/463 (54%), Gaps = 22/463 (4%)

Query: 27  LRAAILDGRLQPGARLPATRALAQRLGVSRNTVLAAYDLLLSEGYLLARPGAGTYVADTL 86
           LR  I  G L  GARLP+TRALA  LGVSRNTVLAAYD L +EGYL+ARPG+G  VA  L
Sbjct: 20  LRRRIFSGALGAGARLPSTRALAAELGVSRNTVLAAYDSLRAEGYLIARPGSGHRVAGDL 79

Query: 87  PASRRGRPARGSMARRDPRLVPLHVPGADLAPTLQPQAS-----RDDFRVGLPDVSAFPF 141
           P         G         V L   G  + P   PQ +     R DF  G  + + FP 
Sbjct: 80  PEPADLGAGLGGAPAGVGTAVALSQWGRRVTPE-DPQPAVAASPRYDFLYGTSNTTLFPH 138

Query: 142 DIWRR--LSDRALRRIARQTADYADPQGQAALREAIAGHVSFTRAVGCAADDIVVTAGAQ 199
             WRR  L    LRR       Y D  G  ALR A+A  +   R +      +V+T G+Q
Sbjct: 139 KDWRRAILGVLDLRRREPGQLFYQDAMGSPALRRAVADWLRLHRGIDTGTRGVVITNGSQ 198

Query: 200 QAFGLLARILVVPGRTVVAVEQLFYPSLREAMLAAGARVVTVPTDAEGLCVERIPPEARV 259
           Q   L  R+LV PG  VVAVE+  Y   RE + A GAR++ +P D +GL V+ +   +R 
Sbjct: 199 QGIDLATRLLVDPG-AVVAVEEPGYQGFREILSALGARLLPIPVDDQGLRVDHLEAVSRD 257

Query: 260 -----VCVTPSHQFPTGVAMSPQRRAALLAFARARNAVVIEDDYDSEFRFAGRPLDALQT 314
                VCVTPSHQFPTG  +SP RR ALLA+A+A  A VIEDDYDSEFR+  RPL AL  
Sbjct: 258 AAVAGVCVTPSHQFPTGAVLSPARRMALLAWAKAEGAWVIEDDYDSEFRYGARPLAALAA 317

Query: 315 LDRAESVFYVGTFSKSLFPALRLGFVVAPPWARAALVRARELADWHGPVLGQEALAAFIA 374
            D    V ++ +FSK+LFPALRLG    P         AR L+D HGP L Q+ALA ++ 
Sbjct: 318 GDDDGRVIHLASFSKALFPALRLGMASVPAGLLGPFGAARRLSDRHGPALEQDALARWME 377

Query: 375 EGHLARHIRKMRKLYGARRTALLDALARHGEGRLEAIPSNAGLHLSAWLHGKTRA--DAV 432
           +G  ARH+R++R     RR  L+DAL RH  G +    ++AGLHL AW  G   A   A 
Sbjct: 378 DGTFARHLRRVRTRQAERRAVLVDALTRHFVGMVRIGGASAGLHLVAWFPGLDAAAMAAW 437

Query: 433 VERAAAVGITLPPLSRFALDPQAPDVPNGLAFGYGLIGESQTD 475
            +RAA +GI + P++R    P A       AF  G  G S  D
Sbjct: 438 ADRAAVLGIGVHPITRHYQGPAA------AAFVLGYAGISVDD 474