Pairwise Alignments

Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 503 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  368 bits (944), Expect = e-106
 Identities = 205/496 (41%), Positives = 309/496 (62%), Gaps = 9/496 (1%)

Query: 14  AAPLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGE 73
           A  +L++  + K FG V  L+ + L+ R G+VH + GENGAGKSTLMK+L G+H    GE
Sbjct: 6   ADTILKITDVTKSFGQVAALKGMRLEVRRGRVHTLLGENGAGKSTLMKILAGVHGATSGE 65

Query: 74  IRIGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGVIDRKAMNAG 133
           I + G+  R  +P  A   G+AI+ QEL+L  + TVA+NI    EP R+G I+ KA+ A 
Sbjct: 66  IVLDGQAYRPANPQEAASLGLAIVFQELSLCNNLTVAENILATREPRRFGFINDKALVAK 125

Query: 134 AEAALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLF 193
           A   +  +   ID   + G LS+A++Q+VEIAK +S DA++++LDEPT++L D E+  LF
Sbjct: 126 AHRIVADLRLPIDVTEKVGNLSIAQRQLVEIAKGLSHDAKVVILDEPTSSLSDSEAEILF 185

Query: 194 DLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGRE 253
           ++I  LR+ G A++YISHRM E+M L+DDI+VI+DG+ ++T    E T+E ++ LMVGR 
Sbjct: 186 EIIGRLRQRGAAIIYISHRMEEIMRLSDDITVIRDGEYVSTHARDEVTIETLIALMVGRR 245

Query: 254 LSDFYPPAAANPPG--AEVFAVEQGGNE-VLHGIDLRLHAGEIVGVAGLEASGKVELARA 310
           + + YPP   +     A V AV++   E     +   + AGEI+G  GL  SG+ E+  A
Sbjct: 246 MDEIYPPPVHHVAADRAPVLAVDRLTREGEFQDVSFDVRAGEILGFFGLVGSGRSEVMNA 305

Query: 311 LFGERRFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAALTLRA 370
           LFG  +   GTVR   +    RSP +A  RG+G++ ++RK EGL L  S+  N  +++ A
Sbjct: 306 LFG-MKSAAGTVRLDGEVVRFRSPDQAIARGVGFVTENRKEEGLVLGHSVEWN--ISMAA 362

Query: 371 LAGPLAGAG--SAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMAREPR 428
           LA    G G       R+     + K+ ++    + P GALSGGNQQK+++A+W+   P+
Sbjct: 363 LADFAGGLGFIRNGAERAAASEQVGKLSIKTNSLETPAGALSGGNQQKIVLAKWLLTRPK 422

Query: 429 LWVICEPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVA 488
           + ++ EPTRG+DVGAK  IY+++R  A  G A+L++SSD+ E++G+ DR+ VM  G   A
Sbjct: 423 VLILDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLGMSDRVVVMHEGAPGA 482

Query: 489 HLPRGA-SEEAVIAQA 503
            L   A + E ++A A
Sbjct: 483 TLEGSALTPETIMAHA 498



 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 13/256 (5%)

Query: 3   PHTAHPTAARDAAPLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKV 62
           P   H  AA D AP+L +  + +        +DVS   RAG++    G  G+G+S +M  
Sbjct: 251 PPPVHHVAA-DRAPVLAVDRLTRE----GEFQDVSFDVRAGEILGFFGLVGSGRSEVMNA 305

Query: 63  LGGIHAPDGGEIRIGGRPVRFGHPSAARQAGIAII---HQELALLPHRTVAQNIF---LG 116
           L G+ +   G +R+ G  VRF  P  A   G+  +    +E  L+   +V  NI    L 
Sbjct: 306 LFGMKSA-AGTVRLDGEVVRFRSPDQAIARGVGFVTENRKEEGLVLGHSVEWNISMAALA 364

Query: 117 HEPSRWGVIDRKAMNAGAEAALRRVGCRIDP-RTECGRLSVAEQQMVEIAKAVSLDARIL 175
                 G I   A  A A   + ++  + +   T  G LS   QQ + +AK +    ++L
Sbjct: 365 DFAGGLGFIRNGAERAAASEQVGKLSIKTNSLETPAGALSGGNQQKIVLAKWLLTRPKVL 424

Query: 176 VLDEPTAALDDVESRKLFDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATL 235
           +LDEPT  +D     +++ +I EL   G A+L IS  + EV+ ++D + V+ +G   ATL
Sbjct: 425 ILDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLGMSDRVVVMHEGAPGATL 484

Query: 236 PAAEATVERIVRLMVG 251
             +  T E I+    G
Sbjct: 485 EGSALTPETIMAHATG 500