Pairwise Alignments

Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  374 bits (960), Expect = e-108
 Identities = 207/486 (42%), Positives = 299/486 (61%), Gaps = 5/486 (1%)

Query: 17  LLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRI 76
           L  ++SI K FG +  LR V+   R G+VHA+ GENGAGKSTLM+VLGG   P  GE+ I
Sbjct: 5   LANLKSISKSFGGIHALRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVI 64

Query: 77  GGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGVIDRKAMNAGAEA 136
            G+      P  AR  GI +IHQELAL P  +VA+NIFLG  P+   +I R ++   A+ 
Sbjct: 65  NGKRTELRDPRDARALGIVVIHQELALAPDLSVAENIFLGELPT---LISRFSLRRRAKQ 121

Query: 137 ALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFDLI 196
            + R+G  IDP    G LSVA QQ+VEIAKA+S D +I+V DEPTA L   ++ KL  +I
Sbjct: 122 LIDRLGFDIDPGRLVGTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQII 181

Query: 197 AELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGRELSD 256
             LR  GV ++YISHR+ EV  +AD ++V+KDG+ + T+   +  ++ I+R+MVGR +++
Sbjct: 182 RGLRDRGVGIVYISHRLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGRPIAN 241

Query: 257 FYPPAAANPPGAEVFAVEQ-GGNEVLHGIDLRLHAGEIVGVAGLEASGKVELARALFGER 315
            +P  +    GAE+  V++     ++  +   + AGEIVG+ GL  SG+ E+ARA+FG  
Sbjct: 242 MFPERSQRTIGAELLNVKKLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARAIFGAD 301

Query: 316 RFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAALTLRALAGPL 375
               GT+         +SPR+A + GIG +P+DRK  G+ + + +R NA +   +     
Sbjct: 302 PLDSGTISLKGKALKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMSSVVNA 361

Query: 376 AGAGSAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMAREPRLWVICEP 435
            G    A  R+ + AL   + ++A+  D PV +LSGGNQQKV++A+W      + ++ EP
Sbjct: 362 LGFLKPALERTDVTALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDVIILDEP 421

Query: 436 TRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVAHL-PRGA 494
           TRG+DVGAKA IY L+   A+ G AVLV+SS+  E+ GLCDR+  M  G+I   L P   
Sbjct: 422 TRGVDVGAKAEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGELTPSNY 481

Query: 495 SEEAVI 500
           SEE ++
Sbjct: 482 SEENLL 487



 Score = 74.7 bits (182), Expect = 7e-18
 Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 12/239 (5%)

Query: 19  EMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRIGG 78
           E+ +++K+  A  ++RDVS   RAG++  + G  G+G++ + + + G    D G I + G
Sbjct: 254 ELLNVKKL-NAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARAIFGADPLDSGTISLKG 312

Query: 79  RPVRFGHPSAARQAGIAII------HQELALLPHRTVAQNIFLGHEPSRWGVIDRKAMNA 132
           + ++   P  A +AGI ++      H  +   P R  A    +    +  G +       
Sbjct: 313 KALKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMSSVVNALGFLKPALERT 372

Query: 133 GAEA---ALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVES 189
              A   +LR     ID       LS   QQ V +AK       +++LDEPT  +D    
Sbjct: 373 DVTALGKSLRLKASSID--APVSSLSGGNQQKVVLAKWFHAGGDVIILDEPTRGVDVGAK 430

Query: 190 RKLFDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRL 248
            +++ LI +L   G A+L IS    E+  L D +  +  GQ+   L  +  + E ++ L
Sbjct: 431 AEIYALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGELTPSNYSEENLLGL 489