Pairwise Alignments
Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45
Subject, 508 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Score = 347 bits (889), Expect = e-100
Identities = 202/489 (41%), Positives = 286/489 (58%), Gaps = 10/489 (2%)
Query: 7 HPTAARDAAPLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGI 66
+P A +LE R I K F V VL V+ + RAG++HA+ GENGAGKSTL+K+L G
Sbjct: 2 NPETVDAARVVLEARRISKSFSGVQVLFSVNFELRAGEIHALMGENGAGKSTLVKILSGF 61
Query: 67 HAPDGGEIRIGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGVID 126
P GE+ + G+PV AA GI IIHQE L H TVA+++FLG E +R+GV+D
Sbjct: 62 EQPSSGEVLLDGQPVTLPANGAAEALGIVIIHQEFNLAEHLTVAESLFLGREVTRFGVLD 121
Query: 127 RKAMNAGAEAALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDD 186
RK M A L +GC +D G LS+AE+QMVEIAKA+S DARI+ +DEPTA L
Sbjct: 122 RKYMRAETRRVLDLLGCHVDANALIGSLSIAEKQMVEIAKAISRDARIVFMDEPTAVLSR 181
Query: 187 VESRKLFDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIV 246
E+ LF + +LR G + +++SH++ EV+ L D ++V++DGQ + T + E I
Sbjct: 182 EETNFLFRQVRKLRDRGTSFVFVSHKLDEVIELTDRVTVLRDGQWVKTAATSMLDGESIA 241
Query: 247 RLMVGRELSDFYPPAAANPPGAE---VFAVEQGGNEVLHGIDLRLHAGEIVGVAGLEASG 303
+LMVGRE+S +P A P + V V+ + + + GEI+G +G+ SG
Sbjct: 242 QLMVGREMSSLFP--AKKEPNVDEEVVLRVDAVSTDYVQDARFEVRKGEILGFSGMIGSG 299
Query: 304 KVELARALFGERRFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDN 363
+ EL A+ G R G V + + A RRG+ Y+ DRK +GL L + N
Sbjct: 300 RTELMEAVAGLRPRLSGEVTIRGETVPSGDVHAANRRGLAYMTKDRKAKGLLLNSGMTAN 359
Query: 364 AALTLRALAGPLAGAG--SAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQQKVMVAR 421
LTL++L G A G S A + + + ++R D ++ +SGGNQQK+++A+
Sbjct: 360 --LTLQSL-GRHARIGYLSPASEAAALKRARRRFDIRVRDGNVVARRMSGGNQQKLLLAK 416
Query: 422 WMAREPRLWVICEPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVM 481
M EP + +I EPTRGIDVG K IY + A A G +++VVSS++ E+IGLC R+ VM
Sbjct: 417 VMETEPDIIIIDEPTRGIDVGTKQQIYHFISALARDGRSIIVVSSEMPEVIGLCTRVAVM 476
Query: 482 ALGRIVAHL 490
GRIV L
Sbjct: 477 REGRIVGML 485
Score = 91.3 bits (225), Expect = 8e-23
Identities = 59/225 (26%), Positives = 114/225 (50%), Gaps = 6/225 (2%)
Query: 33 LRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRIGGRPVRFGHPSAARQA 92
++D + R G++ G G+G++ LM+ + G+ GE+ I G V G AA +
Sbjct: 277 VQDARFEVRKGEILGFSGMIGSGRTELMEAVAGLRPRLSGEVTIRGETVPSGDVHAANRR 336
Query: 93 GIAIIHQEL---ALLPHRTVAQNIFLGH--EPSRWGVIDRKAMNAGAEAALRRVGCRI-D 146
G+A + ++ LL + + N+ L +R G + + A + A RR R+ D
Sbjct: 337 GLAYMTKDRKAKGLLLNSGMTANLTLQSLGRHARIGYLSPASEAAALKRARRRFDIRVRD 396
Query: 147 PRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFDLIAELRRAGVAM 206
R+S QQ + +AK + + I+++DEPT +D ++++ I+ L R G ++
Sbjct: 397 GNVVARRMSGGNQQKLLLAKVMETEPDIIIIDEPTRGIDVGTKQQIYHFISALARDGRSI 456
Query: 207 LYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVG 251
+ +S M EV+ L ++V+++G+++ L E + + I+R G
Sbjct: 457 IVVSSEMPEVIGLCTRVAVMREGRIVGMLEGDEISEQEIMRYAAG 501
Score = 59.7 bits (143), Expect = 2e-13
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 13/229 (5%)
Query: 277 GNEVLHGIDLRLHAGEIVGVAGLEASGKVELARALFGERRFTRGTVRAWDDKGAARSPRE 336
G +VL ++ L AGEI + G +GK L + L G + + G V D P
Sbjct: 24 GVQVLFSVNFELRAGEIHALMGENGAGKSTLVKILSGFEQPSSGEVLL--DGQPVTLPAN 81
Query: 337 AARRGIGYL---PDDRKREGLGLQQSLRDNAALTLRALAGPLAGAGSAARSRSLIDALLN 393
A +G + + E L + +SL +T G L A +R ++D L
Sbjct: 82 GAAEALGIVIIHQEFNLAEHLTVAESLFLGREVTR---FGVLDRKYMRAETRRVLDLLGC 138
Query: 394 KVEVRAADFDMPVGALSGGNQQKVMVARWMAREPRLWVICEPTRGIDVGAKATIYRLLRA 453
V+ A +G+LS +Q V +A+ ++R+ R+ + EPT + ++R +R
Sbjct: 139 HVDANAL-----IGSLSIAEKQMVEIAKAISRDARIVFMDEPTAVLSREETNFLFRQVRK 193
Query: 454 YADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVAHLPRGASEEAVIAQ 502
D G + + VS + E+I L DR+ V+ G+ V + IAQ
Sbjct: 194 LRDRGTSFVFVSHKLDEVIELTDRVTVLRDGQWVKTAATSMLDGESIAQ 242