Pairwise Alignments

Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  345 bits (886), Expect = 2e-99
 Identities = 199/508 (39%), Positives = 296/508 (58%), Gaps = 7/508 (1%)

Query: 1   MTPHTAHPTAARDAAP----LLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGK 56
           ++P T     A  A P    LL    +RK F  V  L DV  + + G VHA+ GENGAGK
Sbjct: 3   LSPTTMAAVRASGAVPKSEYLLTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGK 62

Query: 57  STLMKVLGGIHAPDGGEIRIGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLG 116
           STLMK+L GI+ PD GE+++ G  +R   P  A + GIA+IHQEL L+P  TVA+NI++ 
Sbjct: 63  STLMKILAGIYYPDQGEVKLRGAGIRLKSPLDALENGIAMIHQELNLMPFMTVAENIWIR 122

Query: 117 HEP-SRWGVIDRKAMNAGAEAALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARIL 175
            EP +R+G +D   M         R+   +DP  E   LSVA +QMVEIAKAVS ++ +L
Sbjct: 123 REPKNRFGFVDHGEMRRMTAKLFERLKIDLDPEIEVRHLSVANRQMVEIAKAVSYESDVL 182

Query: 176 VLDEPTAALDDVESRKLFDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATL 235
           ++DEPT+AL + E   LF++I +LR  G+ ++YI+H+M E+  +AD+ SV +DG+ + T 
Sbjct: 183 IMDEPTSALTEREVAHLFEIIRDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTH 242

Query: 236 PAAEATVERIVRLMVGRELSDFYPPAAANPPGAEVFAVEQ-GGNEVLHGIDLRLHAGEIV 294
            + E T + I+R+MVGRE++  +P     P G  V +V+    N V   +   + AGEI+
Sbjct: 243 LSNEVTRDDIIRMMVGREITQMFPKEEV-PIGDVVLSVKNLTLNGVFRDVSFDVRAGEIL 301

Query: 295 GVAGLEASGKVELARALFGERRFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGL 354
           GVAGL  SG+  +A  LFG    + GT+     +    S  +A R  + +L +DRK  G 
Sbjct: 302 GVAGLVGSGRSNVAETLFGVTPASSGTIAIDGKEVVIDSANKAIRHRMAFLTEDRKDTGC 361

Query: 355 GLQQSLRDNAALTLRALAGPLAGAGSAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQ 414
            L   + +N  + +        G  S     +  + +  K+ V+  +    V  LSGGNQ
Sbjct: 362 LLILDILENMQIAVLQDKFVKRGFVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQ 421

Query: 415 QKVMVARWMAREPRLWVICEPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGL 474
           QKV++ RW+   PR+ ++ EPTRGIDVGAKA I+RL+   A  G AV+++SS++ E++G+
Sbjct: 422 QKVLIGRWLLTNPRILILDEPTRGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGM 481

Query: 475 CDRICVMALGRIVAHLPRGASEEAVIAQ 502
            DRI VM  GR+   L R  + +  + +
Sbjct: 482 SDRIMVMHEGRVTGILDRAEATQIKVME 509



 Score = 94.7 bits (234), Expect = 7e-24
 Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 11/226 (4%)

Query: 32  VLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRIGGRPVRFGHPSAARQ 91
           V RDVS   RAG++  + G  G+G+S + + L G+     G I I G+ V     + A +
Sbjct: 287 VFRDVSFDVRAGEILGVAGLVGSGRSNVAETLFGVTPASSGTIAIDGKEVVIDSANKAIR 346

Query: 92  AGIAIIHQE------LALLPHRTVAQNIFLGHEPSRWGVIDRKAMNAGAEAALRRVGCR- 144
             +A + ++      L +L      Q   L  +  + G +  + + A  E   R++  + 
Sbjct: 347 HRMAFLTEDRKDTGCLLILDILENMQIAVLQDKFVKRGFVSEREVTAACEEMSRKLRVKT 406

Query: 145 --IDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFDLIAELRRA 202
             +  R E   LS   QQ V I + +  + RIL+LDEPT  +D     ++  L+ EL R 
Sbjct: 407 PNLQERVE--NLSGGNQQKVLIGRWLLTNPRILILDEPTRGIDVGAKAEIHRLVTELARN 464

Query: 203 GVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRL 248
           GVA++ IS  M EV+ ++D I V+ +G++   L  AEAT  +++ L
Sbjct: 465 GVAVIMISSEMPEVLGMSDRIMVMHEGRVTGILDRAEATQIKVMEL 510