Pairwise Alignments

Query, 528 a.a., O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) from Variovorax sp. SCN45

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  189 bits (481), Expect = 2e-52
 Identities = 148/535 (27%), Positives = 243/535 (45%), Gaps = 45/535 (8%)

Query: 7   MLERVSRNYPGKKAYRCGAVSRTWAEMNQRADRLAGGLMS-LGARRGDCVAILGQESLEI 65
           + E     Y  + A+     + T+ ++ +R+   A  L + L  ++GD VAI+    L+ 
Sbjct: 28  LFESSVAKYADQPAFVNMGATLTYRKLEERSRAFAAYLQNELKLQKGDRVAIMMPNLLQY 87

Query: 66  YEHYFACMKAGLVRVGINWRYAPAEIAHILKDCAVKVVLVEQRCISQLSAALTLVDLPIE 125
               F  ++AG+V V +N  Y P E+ H L D   K ++V     + L   +    +   
Sbjct: 88  PIALFGILRAGMVVVNVNPLYTPRELKHQLNDSGAKAIVVVSNFANTLEQVVEQTPVK-S 146

Query: 126 VVVYGQGDM--------------------------HVMGYERLLARSTPIAPID--LHDS 157
           V++ G GD+                          H +   + L++   +  +   +   
Sbjct: 147 VILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHLPHAISMRQSLSKGRRLQYVKPTIKGD 206

Query: 158 EPLVISYTSGSTGVPKGVVHSHRSVALIIMQG-AISRGLTTDDVWYAATASSW---MACV 213
           +   + YT G+TGV KG + +H ++   ++Q  A    L  D   +  TA       A  
Sbjct: 207 DIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADAAYSPLLADGKEFVVTALPLYHIFALT 266

Query: 214 LN-MIGLANGMTTIITDGAFEIDAFIEETQRHQITTALLVPTIVGRLVDRCSATPEVLSS 272
           +N ++ L  G   ++     +I AF+ E ++H  T    V T+   LV          S+
Sbjct: 267 VNCLLFLHKGANNLLITNPRDIPAFVSELKKHPFTALTGVNTLFNALVSSEEFKTLDFSN 326

Query: 273 LRLLMYGSSPASVGLIERVLGTFRCRLMQTYGMTEGGWVSHLTPADHELGLKGRSELLRS 332
           L+L + G       + ++  G  + RL++ YG+TE   +    P + E G  G      S
Sbjct: 327 LKLSIGGGMAVQRAVADKWQGITKTRLLEGYGLTEASPLLTCCPYNLE-GYNG------S 379

Query: 333 AGRVGGMYQMSIRDEEGTELPLGQAGEVWLRGETTMLRYHNRPSETEEAL-AGGWLHTND 391
            G       M +RDEEG  LP G+ GE++ +G   M  Y  RP ET + +   G+L T D
Sbjct: 380 IGFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQRPEETAKVIDKDGYLATGD 439

Query: 392 IGRFDEEGYLYLLDRKKFLIITGAVNVFPASVEAVLGRHPAVREISVVGAPHPEWGEAVV 451
           IG  DE+G+ +++DRKK +I+    NVFP  VE V+  HP V E++ VG PH   GE V 
Sbjct: 440 IGYMDEQGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHPKVLEVAAVGVPHEVSGELVK 499

Query: 452 AVVSQRPGHPALTTAELGAFAAAQLSRMELPKHVMTMEELPKTVTGKIDKRAIKD 506
             V   P   +LT  ++       L+  ++PK V   +ELPK+  GKI +R ++D
Sbjct: 500 VFVV--PKDKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPKSNVGKILRRELRD 552