Pairwise Alignments

Query, 321 a.a., KEGG: ribose transport system permease protein from Variovorax sp. SCN45

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  156 bits (395), Expect = 6e-43
 Identities = 89/277 (32%), Positives = 156/277 (56%), Gaps = 10/277 (3%)

Query: 39  TLAGVMGLLQRMIALGLVALGQNFVMLGGSIDLSVANLISVSAVLASYFMQGDTGAIGHA 98
           T+  ++ +L++     ++A+G   V+L   IDLSV +++++    A+  +  +   +  A
Sbjct: 54  TVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALCGAFAATLVAMEVPVLV-A 112

Query: 99  VVGVLLVAAAVGTVNGLLIARLGVSPLIATLGVGLVLQGVLTVAFTSLQG------KVPQ 152
           V   LL  AA+G ++G++IA+  V   IATL    +L+GV T+ +T  +           
Sbjct: 113 VPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGV-TMVYTDGRPISTGFTDTAD 171

Query: 153 AYQALAYGSVAGVPVAVLILLAVAVAAAFALTRTVAGAHLFAVGGNADSARLAGIRTSRV 212
            +     G   G+PV V +++ V   A + L  T  G +++AVGGN  + RL+GI   RV
Sbjct: 172 TFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRV 231

Query: 213 LVGAHAMAGLMSGLAGLYLASWLGAGTPWVGRDGGYDLDSIAAVVIGGTLLAGGRGSIAG 272
            +G +A+ GL++ LAG+ + S L +  P  G   GY+LD+IAAVV+GGT L GG+G I G
Sbjct: 232 KIGVYAICGLLAALAGIIVTSRLSSAQPTAGM--GYELDAIAAVVLGGTSLMGGKGRIMG 289

Query: 273 TMAGVFVFATIDAVFNMLQIDSFLSQVLRGLIVVIAV 309
           T+ G  +   ++   N+L + S+   + + +++++AV
Sbjct: 290 TLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAV 326