Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 65/284 (22%), Positives = 136/284 (47%), Gaps = 4/284 (1%)

Query: 7   VRQMRAFVAVYQLGHLSAAAEQLSVTQPAVTVLIRELEARLGVKLFDRTTRSLRRTEAAD 66
           ++ ++ F+ + +  + + AA++  +TQP ++ +I+ LE  LG  L  R  + +  T+A  
Sbjct: 5   IKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQ 64

Query: 67  EAIGFVMRALDEMHQLSRSLSDLSGVRRGRFRVAATSTVAQTLLPPLLRNFLQAHPDVEV 126
                    L + H+L   +S+LSG++ GR R+     ++ +L+  LL ++ + +P VE+
Sbjct: 65  LFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMS-SLIIGLLTSYRKRYPGVEL 123

Query: 127 SVQDCGPLDFVQTLASDRADVGIGSLEQPVPGLVEHVFLRDELVAAALPGKGFDGQSATM 186
            + + G     Q L ++  D+   +L       + +  L    + A LP        + +
Sbjct: 124 QMYEYGGFGCEQALLNNSLDIAFTALPTTHETELINQPLTKYPLLACLPEAHPLAAKSYL 183

Query: 187 TWRQLVQHPLIVVKPGYGIRRLIDKTLADEGLLEQMQVRQEVALLSTALAMAAADLGVAV 246
           +W+    +P I+    + + +LI++     G+  Q+ +            M  AD+G+A+
Sbjct: 184 SWQDFEPYPFILYNEDFSLAKLINRLSRKAGV--QLNIAFRSGQWDFLATMVEADMGLAI 241

Query: 247 VPRSIVTHGAFPSMVTRRLTRPVVERPVALVYRVERSLSPAALA 290
           +P  I    +   +V R + +P +   +AL++R    L+PAA A
Sbjct: 242 LPEPICQKLSNSKLVFRPM-QPALTWDLALIWRQNLPLTPAANA 284