Pairwise Alignments

Query, 314 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 316 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  125 bits (313), Expect = 2e-33
 Identities = 93/312 (29%), Positives = 142/312 (45%), Gaps = 24/312 (7%)

Query: 2   KRWRNINPALVLLVVLVCTMVFMSPLYQTAPGLMSFLQRAAPLVILTCGASFVLIAGGFD 61
           +R   + P+  LL +L+  +    P    A  L  F+++  PL IL  G   V+     D
Sbjct: 11  RRISKVPPSYYLLAMLLVILFVARPQMLNANVLGVFVRQVVPLGILVLGQLLVMRVKSID 70

Query: 62  LSSGALITLV--VIGCALITNGDADMTWTAVAAAYAMGLAVGLLNGLVVTRLKVPSIIAT 119
           LS G +I L+   I   +            VA A   GL +GL NG++V + +V ++I T
Sbjct: 71  LSGGGVILLINYCISSGIFPGASLGFY---VALALTTGLVIGLFNGVMVAKRRVSAVIVT 127

Query: 120 LGGLLSIKGIAMVWSGGAPSGYLPQ------NLRYLGRGVLREVPLTGTLPIAVIVLAVF 173
           L   + + G     S G P G +P+      N R+ G            LP  VI+    
Sbjct: 128 LALSIVLVGFVQYLSSGKPPGDVPKLFADLFNTRFAG------------LPSPVILWIAV 175

Query: 174 VALCFWLMHRTNFGRLVLMIGDNPVAAELAGAPVRRVRVAAFVLSSLSAVTAGILLGGFS 233
            AL   L+ +T FGR V  +G++  AA  +G PV R  + A  L+ L A  A ++     
Sbjct: 176 TALMALLLSQTVFGRFVAAVGESMPAAHFSGVPVERTVILAHTLAGLMAAIAALVQTASI 235

Query: 234 GV-SVDVGTGYDLQAIAAAVIGGVVLLGGRGSIPGACIGALTLYTLFTVLNLLGFSEPLR 292
            V SV VG    + ++AA ++GGVV   G G + G   G L    LF  +   G  +  +
Sbjct: 236 AVGSVRVGLDLPVLSVAATILGGVVFGRGEGGVWGPFFGVLCFAFLFVAMTTFGVGDAGK 295

Query: 293 VAVQGLILIGAA 304
           +  QG+I++ AA
Sbjct: 296 LVAQGMIILLAA 307