Pairwise Alignments

Query, 314 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 318 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  157 bits (396), Expect = 4e-43
 Identities = 111/295 (37%), Positives = 159/295 (53%), Gaps = 8/295 (2%)

Query: 10  ALVLLVVLVCTMVFMSPLYQTAPGLMSFLQRAAPLVILTCGASFVLIAG--GFDLSSGAL 67
           ALVL+V+L+     +SP + T   ++  L  A+ L I+  G + V++ G  G DLS G +
Sbjct: 15  ALVLIVLLLYLGEALSPGFATGGQILRLLIVASLLGIVAAGQNVVILGGREGIDLSVGGV 74

Query: 68  ITLVVIGCALITNGDADMTWTAVAAAYAMGLAVGLLNGLVVTRLKVPSIIATLGGLLSIK 127
           ++L  I    + NG       AVAA  A G   GLLNGL VT L++P ++ TLG L  ++
Sbjct: 75  VSLSAILAGNVMNGADGGILPAVAACLAAGAFFGLLNGLGVTLLRIPPLVMTLGMLGVLQ 134

Query: 128 GIAMVWSGGAPSGYLPQNLRYLGRGVLREVPLTGTLPIAVIVLAVFVALCFWLMHRTNFG 187
           G+ +V   G PSG   Q    L R V +  PL   +P  + +  V   L   +++RT FG
Sbjct: 135 GLLVVIRMGIPSG---QAAPALSRFVTQ--PLAYGIPGIIWLWIVIGILLALMLNRTVFG 189

Query: 188 RLVLMIGDNPVAAELAGAPVRRVRVAAFVLSSLSAVTAGILLGGFSGVS-VDVGTGYDLQ 246
             +  IG N  AA +AG PV+ VR+A F++S + A TAG+ L G+SG S  +VG  Y L 
Sbjct: 190 HRIYAIGSNEHAAYMAGVPVKLVRIALFMISGMFAATAGLCLLGYSGTSFANVGEQYMLP 249

Query: 247 AIAAAVIGGVVLLGGRGSIPGACIGALTLYTLFTVLNLLGFSEPLRVAVQGLILI 301
           +I A V GG  L GG+G   G   GA+ L  L ++L  +   E  R  V G  L+
Sbjct: 250 SIIAVVFGGTSLAGGKGGYTGTMAGAVLLVILQSILTTINIEESGRQMVFGATLL 304