Pairwise Alignments

Query, 314 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 351 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  129 bits (323), Expect = 1e-34
 Identities = 88/316 (27%), Positives = 156/316 (49%), Gaps = 19/316 (6%)

Query: 12  VLLVVLVCTMVFMSPLYQTAPGLMSFLQRAAPLVILTCGASFVLIAGGFDLSSGALITLV 71
           + L++++     M P + T   L+   Q  A   +L  G + V++ GG DLS GA+  + 
Sbjct: 18  IALLLVIAFFSVMVPNFLTTSNLLIMTQHVAITGLLAIGMTLVILTGGIDLSVGAVAGIC 77

Query: 72  -VIGCALITNGDADMTWTA----------VAAAYAMGLAVGLLNGLVVTRLKVPSIIATL 120
            ++  AL+TNG     W            +      G+ VG +NG V+TR  V   I TL
Sbjct: 78  GMVAGALLTNGLP--LWNGSVIFFNVPEVILCVALFGVLVGFVNGAVITRFGVAPFICTL 135

Query: 121 GGLLSIKGIAMVWSGGA--PSGYLPQNLRYLGRGVLREVPLTGT-LPIAVIVLAVFVALC 177
           G +   +G A++++ G+  P+    + L   G   L    L G  LPI +++   F+ L 
Sbjct: 136 GMMYVARGSALLFNDGSTYPNLNGMEALGNTGFSTLGSGTLMGIYLPIWLMI--GFLLLG 193

Query: 178 FWLMHRTNFGRLVLMIGDNPVAAELAGAPVRRVRVAAFVLSSLSAVTAGILLGG-FSGVS 236
           +WL  +T  GR +  IG N  AA LAG P+ + ++  +  S L +   G+++        
Sbjct: 194 YWLTTKTPLGRYIYAIGGNESAARLAGVPIVKAKIFVYAFSGLCSAFVGLIVASQLQTAH 253

Query: 237 VDVGTGYDLQAIAAAVIGGVVLLGGRGSIPGACIGALTLYTLFTVLNLLGFSEPLRVAVQ 296
              G  +++ AI A V+GG  L GGRG + G+ IGA  +  L   + ++G S+  ++ ++
Sbjct: 254 PMTGNMFEMDAIGATVLGGTALAGGRGRVTGSIIGAFVIVFLADGMVMMGVSDFWQMVIK 313

Query: 297 GLILIGAAALTAWRHQ 312
           G++++ A  +  ++ +
Sbjct: 314 GVVIVTAVVVDQFQQK 329