Pairwise Alignments

Query, 386 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 320 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 26/208 (12%)

Query: 96  GWNTMQAEVELNKADIKGFE--YADAQGKDEKQISDIRSLVNSGKCDALIVSPNTSAALT 153
           GW   +  +   +A+ +G +  +ADAQ K E QI  IRS +  G  +A++++P  +    
Sbjct: 38  GWRAAETTLTKQQAEERGIDLKFADAQQKQENQIKAIRSFIAQG-VNAILLAPVVATGWD 96

Query: 154 PAVEEA-CKKLPVVTFDRSVDSL--CPVTAVRSIGGYAWGKVGADFIAANAPKGGKVLVL 210
             +EEA   ++PV+  DR+VD+     +TAV S   +     G   +   A K   V+ L
Sbjct: 97  EVLEEAKDAEIPVILLDRTVDASDDLYLTAVTSDLVHEGSVAGKWLVDTVAGKPCNVVEL 156

Query: 211 R----TAPGVDLFETRWAAAKKVFDAS-----GLKVVGNEFVGGDRAKTKATVADYLSR- 260
           +    ++P +D         KK F+ +      LK+V ++     R K K  +  +L   
Sbjct: 157 QGTTGSSPAID--------RKKGFEQALSGNDNLKIVRSQTGDFTRTKGKEVMESFLKAE 208

Query: 261 -SGK-IDAVWVDLGAVSVAVAEAFEDAG 286
             GK I A++     ++V   +A ++AG
Sbjct: 209 DGGKNICALYAHNDDMAVGAIQAIKEAG 236