Pairwise Alignments

Query, 386 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 309 a.a., rhizopine uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 50.1 bits (118), Expect = 9e-11
 Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 12/250 (4%)

Query: 118 DAQGKDEKQISDIRSLVNSGKCDALIVSP-NTSAALTPAVEEACKKLPVVTFDR---SVD 173
           DAQ    KQ S I++ + +G  DA+IV+P +T A    +   A   +P+V  +R   +VD
Sbjct: 58  DAQNDVAKQQSQIQNFIAAG-VDAIIVNPVDTDATAAMSKIAADAGIPLVYVNREPVNVD 116

Query: 174 SLCPVTAVRSIGGYAWGKVGADFIAANAPKGGKVLVLRTAPGVDLFETRWAAAKKVF--- 230
           +L    A  +      G +    I       GK +V+           R      V    
Sbjct: 117 TLPDKQAFVASNEQESGTLQTKEICKMLGGKGKAVVMMGELSNQAARMRTKDIHDVIATD 176

Query: 231 DASGLKVVGNEFVGGDRAKTKATVADYLSRSGKIDAVWVDLGAVSVAVAEAFEDAGQPYP 290
           +  G+++V  +     R +    + ++LS   + DAV  +   +++   +A + AG+   
Sbjct: 177 ECKGIEIVEEQTANWSRTQGSDLMTNWLSAGLEFDAVISNNDEMAIGAIQALKAAGRSMD 236

Query: 291 --IITGEDQ-QDYLQAWKKNGFKGIAPTYPAYQWRTAVIAALKALKGEPLPSPTWILPQP 347
             +I G D  QD L A              A Q + +V AALK  KGEP+    +I P  
Sbjct: 237 SVVIGGIDATQDALAAMAAGDLDVTVFQNAAGQGKGSVDAALKLAKGEPVEKKVYI-PFE 295

Query: 348 SITAKELPQY 357
            +T   L QY
Sbjct: 296 LVTKDNLAQY 305