Pairwise Alignments

Query, 386 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 15/291 (5%)

Query: 79  YTLCFSNASVGNPWRVVGWNTMQAEVELNKADIKGFEYADAQGKDEKQISDIRSLVNSGK 138
           + + FS A+   PWR      + AE   +  D++     D + + EKQ++D+ +L+   +
Sbjct: 35  FRIGFSQATTIEPWRAQFNKDIIAEAAKHP-DVE-LIITDGEDRTEKQVADVENLIRQ-E 91

Query: 139 CDALIVSPNTSAALTPAVEEAC-KKLPVVTFDRSVDS---LCPVTAVRSIGGYAWGKVGA 194
            DAL+VSP  SA LT  V++A   K+PV   DR+V++      V     + G A G+   
Sbjct: 92  VDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVETDQYTQFVGGDNKLIGRAAGEYAV 151

Query: 195 DFIAANAPKGGKVLVLRTAPGVDLFETRWAAAKKVFDAS-GLKVVGNEFVGGDRAKTKA- 252
           + +       G ++ +    G      R     +  D   G+K + ++   GD  + +A 
Sbjct: 152 ELLGGKGKAEGNIVEIWGGMGTQPAHDRHDGFHEFTDKEPGIKNLLDQ-QSGDWKQDQAY 210

Query: 253 -TVADYLSRSGKIDAVWVDLGAVSVAVAEAFEDAG--QPYPIITGEDQQDYLQAWKKNGF 309
             +A  L  + KID V+     ++     A +DAG  +    I  +   +    W  NG 
Sbjct: 211 NIMATALRNNEKIDLVYGHNDPMAYGAYLAAKDAGREKEMKFIGIDALPNEGVTWVNNGE 270

Query: 310 KGIAPTYPAYQWRTAVIAALKALKGEPLPSPTWILPQPSITAKELPQYVND 360
                 Y A      +  A+K LKGE +   T  L    +T +   Q + D
Sbjct: 271 LTATFLY-ATPGAEGLRQAVKFLKGEKV-EKTVTLDTMKVTKENAAQILKD 319