Pairwise Alignments

Query, 524 a.a., Mobile element protein from Variovorax sp. SCN45

Subject, 550 a.a., protein in ISRm14 from Sinorhizobium meliloti 1021

 Score =  197 bits (500), Expect = 1e-54
 Identities = 174/542 (32%), Positives = 242/542 (44%), Gaps = 50/542 (9%)

Query: 10  FAALQQALA--EATRRSESLVGELRVVTTERDLALERLRAL----QGQL-------FAAK 56
           FAA+Q  L+   A R+ E      + V  E+D  +  L+ L    +GQ+       F  K
Sbjct: 21  FAAMQFELSVERAARQHE------QAVVAEKDAFIAELKELIEKLEGQVHDYRRTKFGPK 74

Query: 57  SEARGSEQKDLFLNEAE-ALAPTAQTLPA-----ESDDEESTTVAGHQRKKRGRKPLDPA 110
           SE     Q +L L + E A+A T   + A     E+   +   VA   RK+R  + L   
Sbjct: 75  SEKLDPAQMELALEDLETAIAETQARIAAVEKKIEASASDPDKVA--PRKERKARALPEH 132

Query: 111 LPRDIVRHELPESERVCAHDGHALVEIGAEVSEQMHVIPEQVRVLQHHRIKYACPCCDLS 170
           LPR  V   +     VC      +V IG + +E++  IP +  V+   R KYACP     
Sbjct: 133 LPR--VERVIEPESIVCPCGCGNMVRIGEDRTERLDRIPARYEVIVTIRPKYACPKGRTG 190

Query: 171 LKVAPTPARIIPRGLLTEEAQAWVITGKYQFGMPLYRTAVLLRRFGGNIVSNTLAAGVVR 230
           +  A  PA ++     TE   A +   K+   MPL R A ++ R G  I    LA  + R
Sbjct: 191 VVQARAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPIDRTVLADWMGR 250

Query: 231 IGLAVQPVINLLRDHLL-DSDLIYGDETTVQVLKEPGRKAQTKSYMWAQM------NGSG 283
            G  + PV++ +   LL +S  +Y DETT  VL +PGR      Y+WA +      NGS 
Sbjct: 251 TGSEIAPVVDHMAKRLLWESTRLYVDETTAPVL-DPGRGKTKTGYLWAVLRDDRGWNGSA 309

Query: 284 PPVRLFAYAPGRGAMHADKLYAGIRRGATFVSDGYQVYDGIAA-----GHGLTHLGCWVH 338
           PP  +F Y PGR   +A ++  G     T   D Y  Y  +A      G  L    CW H
Sbjct: 310 PPGVVFHYRPGRKGEYAAEILDGFN--GTIQVDAYGGYSHLATLDRVGGDPLKLAFCWAH 367

Query: 339 ARRPFVKAEEAIPKAARSPDQLATRFIKLIGKLYRAEARAEKWTPQRRGRLRKRYSASVV 398
            RR  +KA        +S   +    +  I  LY+ E       P+ R  +R+  S  +V
Sbjct: 368 GRRKLIKA------TPKSGSPIVDEALVRIAALYKIEDSIRGSDPEHRRAVRQELSLPLV 421

Query: 399 SNIEQLLLTNLHAVAPTSLLGEALHYLHGQWPKLIRFLESGSWPLDSNPVENAIRPFVVG 458
                 L      V+  S LG+AL Y+  +      FL+ G   +DSN VENAIR   + 
Sbjct: 422 DAFFAWLAAQAKRVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRPAMN 481

Query: 459 RKGWLFADTVGGANASANLYSLIETAKANGIEPYRYLVALFKKLPLAQTADDYEALLPWN 518
           R+  LFA    G    A   SLI T K NG+EPY YL  LF +L     A D +AL+PW 
Sbjct: 482 RRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYAYLCDLFTRLANGHLAKDIDALMPWA 541

Query: 519 IA 520
            A
Sbjct: 542 YA 543