Pairwise Alignments

Query, 142 a.a., putative signal-transduction protein with CBS domains from Variovorax sp. SCN45

Subject, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

 Score = 47.8 bits (112), Expect = 1e-10
 Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 19  SPHATVFDALATLARFEVGALMVMDGEKLVGFLSERDYTRKVA-------LQGKNSKE-- 69
           +P   + D   T+ R     L V+  EKLVG ++  D+ +          ++  N +E  
Sbjct: 160 TPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVKLFGSDWAFNHMKTGNIREIT 219

Query: 70  -VRVSEIMTPDVMTVTPQTRTRACMTLMSQRKFRHLPVVEGDKVVGMISIQDLM 122
            VR+ +IM  ++++VT   +    +  M++     LPVV+G+K++G+I+ +D++
Sbjct: 220 NVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVDGEKLIGLITEKDIV 273



 Score = 43.5 bits (101), Expect = 3e-09
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 3/95 (3%)

Query: 35  EVGALMVMDGEK-LVGFLSERDYTRKVALQGKNSKEVRVSEIMTPDVMTVTPQTRTRACM 93
           ++G + V+D    L+  ++ERD  +   L+ +  +++ V + MT +V+  TP  R +   
Sbjct: 112 KIGGMPVIDKSGVLITTINERDVIKY--LKDQVDEKLLVKDCMTENVVFATPGERLKDVA 169

Query: 94  TLMSQRKFRHLPVVEGDKVVGMISIQDLMDDIISD 128
             M +  FR LPVV  +K+VG+I+  D +    SD
Sbjct: 170 RTMLRNGFRRLPVVSEEKLVGIITSTDFVKLFGSD 204



 Score = 34.7 bits (78), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 26  DALATLARFEVGALMVMDGEKLVGFLSERDYTR 58
           DA+  +    +G L V+DGEKL+G ++E+D  +
Sbjct: 242 DAIKKMNELNIGVLPVVDGEKLIGLITEKDIVK 274



 Score = 23.1 bits (48), Expect = 0.004
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 72  VSEIMTPDVMTVTPQTRTRACMTLMSQRKFRHLPVVEGDKVV 113
           V EIMT +V+ +         + L  ++K   +PV++   V+
Sbjct: 84  VKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVL 125