Pairwise Alignments

Query, 302 a.a., Inner membrane protein YedI from Variovorax sp. SCN45

Subject, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  321 bits (822), Expect = 2e-92
 Identities = 188/310 (60%), Positives = 225/310 (72%), Gaps = 15/310 (4%)

Query: 3   SSLLLLLDDIATVLDDVSVLTKVAAKKTAGVLGDDLALNAQQVSGVRAEREIPVVWAVCK 62
           +SLL LLDDIATVLDDV++++K+AAKKTAGVLGDDLALNAQQVSGV AEREIPVVWAV K
Sbjct: 4   ASLLTLLDDIATVLDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVVWAVAK 63

Query: 63  GSFINKAILVPAALAIGTWLPWLVTPLLMVGGAFLCFEGAEKLAHKFLH--KKAHAE--- 117
           GSF NK ILVPAAL I +  PWL+ PLL++GG FLCFEGAEK+  K+LH   K +AE   
Sbjct: 64  GSFRNKLILVPAALIISSIAPWLIMPLLLIGGLFLCFEGAEKILEKWLHPEPKQNAEQRA 123

Query: 118 ----DTGRHEQAVADASVDVVAIEKDKIKGAVRTDFILSAEIIAITLGTVQGQPFTTQLS 173
               + G   +++A  S  +   EK KI GA+RTDFILSAEII I LGTVQG    TQ+ 
Sbjct: 124 AAIVNEGLETESLATES--LAEYEKRKIGGAIRTDFILSAEIIVIALGTVQGHSMLTQIL 181

Query: 174 VLVGIALIMTIGVYGLVAGIVKLDDAGLYLS-QRAGAASRAVGRGILVA-APWLMKALSV 231
           V+  IA+IMTIGVYGLVAGIVKLDD G YL  Q  G   +A   G+LV  AP LMK L+V
Sbjct: 182 VVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRQSKGQGLKASLGGVLVRFAPKLMKGLTV 241

Query: 232 AGTAAMFLVGGGILVHGVPALGHAVEDWAKATGG--VFGTLGSMGVNAGVGVVAGAIVLA 289
            GTAAMFLVGGGI+VH VPA+ H +E          V GTL    +N  +GVVAG++++A
Sbjct: 242 VGTAAMFLVGGGIVVHNVPAVHHILEPMLDVVHAWPVVGTLMPTLMNGVIGVVAGSLLVA 301

Query: 290 VVELVGKLRG 299
           V+E+  K+RG
Sbjct: 302 VMEVWHKVRG 311