Pairwise Alignments

Query, 223 a.a., LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) from Variovorax sp. SCN45

Subject, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  214 bits (545), Expect = 1e-60
 Identities = 116/210 (55%), Positives = 146/210 (69%), Gaps = 8/210 (3%)

Query: 10  VHEDDHLLAFDKPAGLLCVPGRGEDKQDCLSARALLQWPDALIVHRLDMGTSGLVVMARG 69
           ++ED  L+  +KPAGLL VPGRGEDK DCL +R    + DA+I HRLDM TSGL+V+ARG
Sbjct: 15  LYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAVFADAMIAHRLDMDTSGLLVLARG 74

Query: 70  IEMQRALSAAFAERRVHKRYEAVVDGTLPQLDEWSVIDAPLMADWPRRPLQKID-PAGKP 128
             MQ+ L   F ER+V KRY+AVV G L   D+   +D PL+ DWP RP QK+D   GKP
Sbjct: 75  PAMQKKLFEMFRERKVSKRYQAVVAGVLQ--DKEGEVDLPLIVDWPNRPRQKVDFQEGKP 132

Query: 129 SVTRWKAISAWSGEPASSAATHVLLEPLTGRSHQLRVHLLSIGHPILGDALYGDAALQAR 188
           S+TR++ ++      A++ ++ V LEP+TGR+HQLRVH+ +IGHPILGD LY   A QAR
Sbjct: 133 SLTRFRRLAV----DAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDELYAGPA-QAR 187

Query: 189 APRLLLHASELGFVHPVTMEELRFRRTPDF 218
           A RLLLHAS L F HP+T E L F   P F
Sbjct: 188 AERLLLHASRLEFRHPITDEALSFESPPPF 217