Pairwise Alignments

Query, 223 a.a., LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) from Variovorax sp. SCN45

Subject, 375 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  110 bits (275), Expect = 4e-29
 Identities = 77/218 (35%), Positives = 112/218 (51%), Gaps = 24/218 (11%)

Query: 6   PLHPVHEDDHLLAFDKPAGLLCVPGRGEDKQDCLSARA-----LLQWPDALIVHRLDMGT 60
           P   V+ED+ +L  +KPAGL+  PG G      L+A       L Q P A IVHRLD  T
Sbjct: 101 PFPVVYEDEAILIINKPAGLVVHPGSGNWSGTLLNALLHHTPQLAQVPRAGIVHRLDKDT 160

Query: 61  SGLVVMARGIEMQRALSAAFAERRVHKRYEAVVDGTLPQLDEWSVIDAPLMADWPRRPLQ 120
           SGL+V+A+ +E Q  L      R V + Y A++ G    L+    +DAP+     R P Q
Sbjct: 161 SGLMVVAKTLEAQTDLVRQLQARTVKREYRALLVG---YLNRNGTVDAPI----GRHPTQ 213

Query: 121 KIDPA-----GKPSVTRWKAISAWSGEPASSAATHVLLEPLTGRSHQLRVHLLSIGHPIL 175
           +   A     G+ + T +  +  +         T V     TGR+HQ+RVH+ ++G P++
Sbjct: 214 RTKMAVVQHNGREARTHYTVLEHF------ERCTLVQCRLETGRTHQIRVHMAALGFPLV 267

Query: 176 GDALYGDA-ALQARAPRLLLHASELGFVHPVTMEELRF 212
           GDA+Y        R PR  LHA  LG +HP+T E +++
Sbjct: 268 GDAVYNKGKTAGVRFPRQALHAYRLGLIHPLTREPMQW 305