Pairwise Alignments

Query, 223 a.a., LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) from Variovorax sp. SCN45

Subject, 264 a.a., tRNA pseudouridine synthase TruC from Klebsiella michiganensis M5al

 Score =  100 bits (248), Expect = 3e-26
 Identities = 77/234 (32%), Positives = 120/234 (51%), Gaps = 24/234 (10%)

Query: 7   LHPVHEDDHLLAFDKPAGLLCVPGRGEDKQDCLSARALLQ---WPDALIVHRLDMGTSGL 63
           L  +++D  L+A +KP+G L V     D+ + +     ++          HRLD  TSG+
Sbjct: 2   LEILYQDQWLVAVNKPSGWL-VHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGV 60

Query: 64  VVMARGIEMQRALSAAFAERRVHKRYEAVVDGTLPQLDEWSVIDAPLMADWPRRP----L 119
           ++M    E  R LS  F + ++ KRY A+  G L   ++ +V+D PL+ +  +       
Sbjct: 61  LLMGLSSEAGRLLSQQFEQHQMQKRYHAIARGWL---NDEAVLDYPLVEELDKIADKFAR 117

Query: 120 QKIDPAGKPSVTRWKAISAW-----SGEPASSAATHVLLEPLTGRSHQLRVHLLSIGHPI 174
           +  DP  +P+VT ++ ++       +G   ++  + V LEP TGR HQLR HL  + HPI
Sbjct: 118 ENKDP--QPAVTHYRGLATVEMAVATGRYPTTRYSLVELEPKTGRKHQLRRHLAHLRHPI 175

Query: 175 LGDALYGD------AALQARAPRLLLHASELGFVHPVTMEELRFRRTPDFVALR 222
           +GD+ +GD      AA      RL+LHAS+L   HP T E L  R   D V +R
Sbjct: 176 IGDSKHGDLRQNRSAAEHFGCDRLMLHASQLSLTHPFTGEPLVIRAGLDDVWMR 229