Pairwise Alignments

Query, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  238 bits (606), Expect = 9e-67
 Identities = 173/515 (33%), Positives = 265/515 (51%), Gaps = 45/515 (8%)

Query: 108 LAVNLPMRLRWNFHRLMLGQSMAFYQDEFAGRITAKVMQTA----LAVRETIFVLADVLV 163
           LA  +   L    +R ++G  + +++    G+I A+V + A         T+ +L D L+
Sbjct: 232 LASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLD-LI 290

Query: 164 AMGVYVATMIILVGVLDAQLVWPFLIWLVLYVVSLIYFVPRLGKVGKAQADARALMTGRV 223
            + V++A M      L   ++   +I+ VL++++     P + K  +++ ++ A  T  +
Sbjct: 291 FVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIA----GPLIRKKVESEYESDANATTFL 346

Query: 224 TDAYTNIATVKLFSHTQREAGFARDAMREFMHTGYGQMRLVSAFEIVNHTLSMGLTAGM- 282
           T+A T I T+K    T  E  F     R          +L  +F+     L  G    + 
Sbjct: 347 TEAVTGIETIKT---TATEHRFLEQWQRIL------SQQLNRSFDAQKSGLIAGQAIALV 397

Query: 283 ----AGMALWLWSNGAVGVGAVAAATAMALRLQGMSHWIMWEMTSLFENIGTV-QDGMKT 337
               A + LW W   AV  G +     +A  +      +   +T     +  + QD   T
Sbjct: 398 QKLTAALLLW-WGVSAVLKGEITPGQLVAFNM------LAGHVTQPVLRLAQIWQDFQHT 450

Query: 338 LSRPRTVLDAADAT-------VLQVPQ--GEVRFEHASFRYGDGGRRVIDDLNLTVKPGE 388
           L   R V D  D         +  VP+  G + F +  FRY      V+ +L+L +KPG+
Sbjct: 451 LIALRRVGDILDEPRENSKQGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLKIKPGQ 510

Query: 389 KIGLVGRSGAGKSTLVNLLLRFHDLESGRILIDGQDIAHVTQDSLRSHIGMVTQDTSLMH 448
            IG+ G SG+GKSTL  LL R +  + G++L+DG D+A     SLR ++ +V Q++ L  
Sbjct: 511 FIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFS 570

Query: 449 RSVADNVAYGRPDATREQIEAAARRAEAHDFIQTLGDAGGRRGYEAHVGERGVKLSGGQR 508
            SVADN+   +P A+ E+I  AA+ A A  FI+ L       G+   VGE+G  LSGGQR
Sbjct: 571 GSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLP-----HGFNQPVGEKGAALSGGQR 625

Query: 509 QRVAIARVMLKDAPILLLDEATSALDSEVEAAIQQSLYTLMEGKTVIAIAHRLSTIAAMD 568
           QR+A+AR +L +  ILLLDEATSALD   EA+I  ++  +  G+TVI+IAHRL+TI   D
Sbjct: 626 QRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHAD 685

Query: 569 RLIVLDEGRVVEEGDHRTLMAQGGLYARLWAHQSG 603
            + VLD+G+V E G H  L+AQ GLYA+LW  Q G
Sbjct: 686 NIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQVG 720